EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0087037	RRM_1	PF00076.22	2.2e-63	1	3
MGP_AKRJ_P0087037	RRM_1	PF00076.22	2.2e-63	2	3
MGP_AKRJ_P0087037	RRM_1	PF00076.22	2.2e-63	3	3
MGP_AKRJ_P0087039	RRM_1	PF00076.22	2.2e-63	1	3
MGP_AKRJ_P0087039	RRM_1	PF00076.22	2.2e-63	2	3
MGP_AKRJ_P0087039	RRM_1	PF00076.22	2.2e-63	3	3
MGP_AKRJ_P0087034	RRM_1	PF00076.22	3.1e-60	1	3
MGP_AKRJ_P0087034	RRM_1	PF00076.22	3.1e-60	2	3
MGP_AKRJ_P0087034	RRM_1	PF00076.22	3.1e-60	3	3
MGP_AKRJ_P0087036	RRM_1	PF00076.22	7.6e-51	1	3
MGP_AKRJ_P0087036	RRM_1	PF00076.22	7.6e-51	2	3
MGP_AKRJ_P0087036	RRM_1	PF00076.22	7.6e-51	3	3
MGP_AKRJ_P0087042	RRM_1	PF00076.22	1.8e-26	1	2
MGP_AKRJ_P0087042	RRM_1	PF00076.22	1.8e-26	2	2
MGP_AKRJ_P0087041	RRM_1	PF00076.22	2.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0087039	-	1580	-	MGP_AKRJ_P0087039	375 (aa)	-	-
MGP_AKRJ_T0087038	-	953	-	MGP_AKRJ_P0087038	106 (aa)	-	-
MGP_AKRJ_T0087037	-	2033	-	MGP_AKRJ_P0087037	375 (aa)	-	-
MGP_AKRJ_T0087036	-	2835	-	MGP_AKRJ_P0087036	336 (aa)	-	-
MGP_AKRJ_T0087035	-	4255	-	-	- (aa)	-	-
MGP_AKRJ_T0087034	-	4481	XM_006507570	MGP_AKRJ_P0087034	392 (aa)	XP_006507633	P70318
MGP_AKRJ_T0087042	-	1344	-	MGP_AKRJ_P0087042	244 (aa)	-	-
MGP_AKRJ_T0087043	-	784	-	MGP_AKRJ_P0087043	41 (aa)	-	-
MGP_AKRJ_T0087040	-	2319	-	MGP_AKRJ_P0087040	135 (aa)	-	-
MGP_AKRJ_T0087041	-	562	-	MGP_AKRJ_P0087041	107 (aa)	-	-
MGP_AKRJ_T0087046	-	1808	-	-	- (aa)	-	-
MGP_AKRJ_T0087047	-	674	-	-	- (aa)	-	-
MGP_AKRJ_T0087044	-	560	-	-	- (aa)	-	-
MGP_AKRJ_T0087045	-	804	-	MGP_AKRJ_P0087045	140 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0032997	Tial1	64	31.461	MGP_AKRJ_G0035651	Rbmx	90	32.258
MGP_AKRJ_G0032997	Tial1	100	87.440	MGP_AKRJ_G0030872	Tia1	97	86.992
MGP_AKRJ_G0032997	Tial1	81	37.333	MGP_AKRJ_G0027480	Celf3	70	34.091
MGP_AKRJ_G0032997	Tial1	94	31.008	MGP_AKRJ_G0021736	Pabpc1	56	34.783
MGP_AKRJ_G0032997	Tial1	67	30.769	MGP_AKRJ_G0033245	Elavl1	95	30.769
MGP_AKRJ_G0032997	Tial1	94	31.783	MGP_AKRJ_G0023071	Pabpc6	56	34.014
MGP_AKRJ_G0032997	Tial1	59	35.616	MGP_AKRJ_G0018862	Msi2	58	35.616
MGP_AKRJ_G0032997	Tial1	72	34.615	MGP_AKRJ_G0028355	Elavl2	93	34.615
MGP_AKRJ_G0032997	Tial1	64	31.461	MGP_AKRJ_G0033715	-	67	31.915
MGP_AKRJ_G0032997	Tial1	99	31.618	MGP_AKRJ_G0027119	Pabpc4l	94	33.333
MGP_AKRJ_G0032997	Tial1	65	31.481	MGP_AKRJ_G0025277	Celf2	61	34.177
MGP_AKRJ_G0032997	Tial1	67	40.244	MGP_AKRJ_G0017425	Cirbp	85	40.244
MGP_AKRJ_G0032997	Tial1	62	32.184	MGP_AKRJ_G0022663	Ncbp2	71	33.333
MGP_AKRJ_G0032997	Tial1	53	32.143	MGP_AKRJ_G0034812	Celf6	54	31.818
MGP_AKRJ_G0032997	Tial1	92	32.500	MGP_AKRJ_G0024305	Pabpc2	50	35.036
MGP_AKRJ_G0032997	Tial1	73	35.897	MGP_AKRJ_G0028486	Elavl4	88	35.897
MGP_AKRJ_G0032997	Tial1	94	30.233	MGP_AKRJ_G0028651	Pabpc4	100	33.333
MGP_AKRJ_G0032997	Tial1	73	32.000	MGP_AKRJ_G0027259	Rbm46	52	30.000
MGP_AKRJ_G0032997	Tial1	81	31.111	MGP_AKRJ_G0019408	Rbfox3	53	31.868
MGP_AKRJ_G0032997	Tial1	73	33.019	MGP_AKRJ_G0028780	Trnau1ap	60	32.386
MGP_AKRJ_G0032997	Tial1	69	31.469	MGP_AKRJ_G0029872	Msi1	56	41.379
MGP_AKRJ_G0032997	Tial1	73	37.179	MGP_AKRJ_G0034378	Elavl3	90	37.179