EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0034812 (Gene tree)
Gene ID: -
Gene Symbol: Celf6
Alias: 6330569O16Rik|Brunol6
Full Name: CUGBP%2C Elav-like family member 6
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Plus strand
Length: 29199 bases
Position: chr9:58361370-58390568
Accession: 1923433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0092681	RRM_1	PF00076.22	2.1e-51	1	3
MGP_AKRJ_P0092681	RRM_1	PF00076.22	2.1e-51	2	3
MGP_AKRJ_P0092681	RRM_1	PF00076.22	2.1e-51	3	3
MGP_AKRJ_P0092679	RRM_1	PF00076.22	2.6e-51	1	3
MGP_AKRJ_P0092679	RRM_1	PF00076.22	2.6e-51	2	3
MGP_AKRJ_P0092679	RRM_1	PF00076.22	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0092680	-	2892	-	MGP_AKRJ_P0092680	162 (aa)	-	-
MGP_AKRJ_T0092681	-	2697	-	MGP_AKRJ_P0092681	460 (aa)	-	-
MGP_AKRJ_T0092682	-	449	-	-	- (aa)	-	-
MGP_AKRJ_T0092683	-	591	-	-	- (aa)	-	-
MGP_AKRJ_T0092679	-	2941	-	MGP_AKRJ_P0092679	481 (aa)	-	-
MGP_AKRJ_T0092678	-	3055	XM_006511540	MGP_AKRJ_P0092678	182 (aa)	XP_006511603	Q7TN33

Gene Model

Click here to download MGP_AKRJ_G0034812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0034812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0034812	Celf6	51	34.483	MGP_AKRJ_G0035943	Pabpc5	63	34.483
MGP_AKRJ_G0034812	Celf6	52	42.105	MGP_AKRJ_G0035314	Rbms3	82	42.105
MGP_AKRJ_G0034812	Celf6	62	32.955	MGP_AKRJ_G0030872	Tia1	85	36.000
MGP_AKRJ_G0034812	Celf6	75	85.526	MGP_AKRJ_G0027480	Celf3	81	87.368
MGP_AKRJ_G0034812	Celf6	95	35.802	MGP_AKRJ_G0028486	Elavl4	85	40.741
MGP_AKRJ_G0034812	Celf6	77	39.062	MGP_AKRJ_G0023071	Pabpc6	64	39.062
MGP_AKRJ_G0034812	Celf6	54	35.802	MGP_AKRJ_G0017787	Rbms2	50	35.802
MGP_AKRJ_G0034812	Celf6	91	45.567	MGP_AKRJ_G0025277	Celf2	79	80.952
MGP_AKRJ_G0034812	Celf6	75	84.783	MGP_AKRJ_G0017499	Celf5	93	80.645
MGP_AKRJ_G0034812	Celf6	57	44.444	MGP_AKRJ_G0033245	Elavl1	97	44.444
MGP_AKRJ_G0034812	Celf6	68	37.113	MGP_AKRJ_G0028651	Pabpc4	67	35.211
MGP_AKRJ_G0034812	Celf6	100	67.200	MGP_AKRJ_G0024143	Celf4	99	67.066
MGP_AKRJ_G0034812	Celf6	54	31.818	MGP_AKRJ_G0032997	Tial1	53	32.143
MGP_AKRJ_G0034812	Celf6	91	45.549	MGP_AKRJ_G0026079	Celf1	98	45.135
MGP_AKRJ_G0034812	Celf6	66	32.500	MGP_AKRJ_G0018208	Hnrnpab	65	31.414
MGP_AKRJ_G0034812	Celf6	89	37.037	MGP_AKRJ_G0028355	Elavl2	78	40.741
MGP_AKRJ_G0034812	Celf6	79	31.250	MGP_AKRJ_G0030630	Hnrnpa2b1	66	32.143
MGP_AKRJ_G0034812	Celf6	57	42.308	MGP_AKRJ_G0034378	Elavl3	80	41.975