EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0034853 (Gene tree)
Gene ID: -
Gene Symbol: Rab11a
Alias: Rab11|Rab11A
Full Name: RAB11A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 21249 bases
Position: chr9:63689976-63711224
Accession: 1858202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0092857	MMR_HSR1	PF01926.23	2.3e-07	1	1
MGP_AKRJ_P0092858	MMR_HSR1	PF01926.23	2.5e-07	1	1
MGP_AKRJ_P0092856	MMR_HSR1	PF01926.23	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0092857	-	462	-	MGP_AKRJ_P0092857	153 (aa)	-	-
MGP_AKRJ_T0092856	-	760	-	MGP_AKRJ_P0092856	216 (aa)	-	-
MGP_AKRJ_T0092855	-	397	-	-	- (aa)	-	-
MGP_AKRJ_T0092854	-	500	-	MGP_AKRJ_P0092854	86 (aa)	-	-
MGP_AKRJ_T0092853	-	603	-	-	- (aa)	-	-
MGP_AKRJ_T0092852	-	726	-	MGP_AKRJ_P0092852	86 (aa)	-	P62492
MGP_AKRJ_T0092859	-	695	-	-	- (aa)	-	-
MGP_AKRJ_T0092858	-	595	-	MGP_AKRJ_P0092858	155 (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0034853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0034853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0034853	Rab11a	93	48.252	MGP_AKRJ_G0024062	Rab18	78	47.531
MGP_AKRJ_G0034853	Rab11a	100	50.000	MGP_AKRJ_G0018001	Rab1a	85	52.299
MGP_AKRJ_G0034853	Rab11a	76	31.667	MGP_AKRJ_G0019147	Arl4d	58	31.667
MGP_AKRJ_G0034853	Rab11a	90	40.426	MGP_AKRJ_G0035597	Rab33a	74	39.665
MGP_AKRJ_G0034853	Rab11a	91	56.835	MGP_AKRJ_G0027963	Rab2a	81	54.971
MGP_AKRJ_G0034853	Rab11a	90	43.796	MGP_AKRJ_G0023915	Rab12	70	37.799
MGP_AKRJ_G0034853	Rab11a	92	34.752	MGP_AKRJ_G0015842	Rab23	80	32.984
MGP_AKRJ_G0034853	Rab11a	91	44.604	MGP_AKRJ_G0032424	Rab30	97	37.981
MGP_AKRJ_G0034853	Rab11a	89	42.143	MGP_AKRJ_G0036011	Rab9b	86	41.040
MGP_AKRJ_G0034853	Rab11a	75	40.000	MGP_AKRJ_G0022175	Rabl2	67	37.908
MGP_AKRJ_G0034853	Rab11a	68	30.065	MGP_AKRJ_G0016465	Arl8a	77	30.065
MGP_AKRJ_G0034853	Rab11a	81	34.127	MGP_AKRJ_G0031382	Kras	87	37.725
MGP_AKRJ_G0034853	Rab11a	95	54.110	MGP_AKRJ_G0025597	Rab14	97	54.422
MGP_AKRJ_G0034853	Rab11a	84	38.281	MGP_AKRJ_G0032484	Rab6a	84	35.955
MGP_AKRJ_G0034853	Rab11a	88	49.265	MGP_AKRJ_G0035770	Rab39b	82	46.857
MGP_AKRJ_G0034853	Rab11a	93	42.254	MGP_AKRJ_G0023906	Rab31	86	41.071
MGP_AKRJ_G0034853	Rab11a	78	31.746	MGP_AKRJ_G0019636	Arl4a	60	31.746
MGP_AKRJ_G0034853	Rab11a	74	30.303	MGP_AKRJ_G0019500	Dnajc27	60	30.303
MGP_AKRJ_G0034853	Rab11a	95	70.748	MGP_AKRJ_G0027328	Rab25	99	62.150
MGP_AKRJ_G0034853	Rab11a	81	34.921	MGP_AKRJ_G0027614	Nras	95	37.931
MGP_AKRJ_G0034853	Rab11a	97	52.201	MGP_AKRJ_G0024632	Rab1b	84	55.357
MGP_AKRJ_G0034853	Rab11a	88	35.821	MGP_AKRJ_G0035105	Rab6b	77	35.404
MGP_AKRJ_G0034853	Rab11a	90	43.066	MGP_AKRJ_G0026897	Rab22a	81	42.038
MGP_AKRJ_G0034853	Rab11a	88	31.293	MGP_AKRJ_G0030280	Rasl11a	60	31.293
MGP_AKRJ_G0034853	Rab11a	86	34.586	MGP_AKRJ_G0029273	Rheb	89	32.927
MGP_AKRJ_G0034853	Rab11a	87	38.686	MGP_AKRJ_G0030902	Rab7	93	42.857
MGP_AKRJ_G0034853	Rab11a	88	48.148	MGP_AKRJ_G0023815	Rab5a	91	41.951
MGP_AKRJ_G0034853	Rab11a	93	41.379	MGP_AKRJ_G0027127	Rab33b	85	37.799
MGP_AKRJ_G0034853	Rab11a	91	56.115	MGP_AKRJ_G0021227	Rab2b	95	51.366
MGP_AKRJ_G0034853	Rab11a	89	43.885	MGP_AKRJ_G0019310	Rab37	77	45.181
MGP_AKRJ_G0034853	Rab11a	81	34.921	MGP_AKRJ_G0033128	Hras	85	37.654
MGP_AKRJ_G0034853	Rab11a	88	49.630	MGP_AKRJ_G0019104	Rab5c	90	41.262
MGP_AKRJ_G0034853	Rab11a	91	46.763	MGP_AKRJ_G0019799	Rab15	93	40.887
MGP_AKRJ_G0034853	Rab11a	100	95.425	MGP_AKRJ_G0023460	Rab11b	100	89.908
MGP_AKRJ_G0034853	Rab11a	94	35.780	MGP_AKRJ_G0017288	Rab36	79	35.780
MGP_AKRJ_G0034853	Rab11a	81	31.746	MGP_AKRJ_G0035082	Mras	85	32.768
MGP_AKRJ_G0034853	Rab11a	79	39.669	MGP_AKRJ_G0031489	Rasl2-9	70	36.364
MGP_AKRJ_G0034853	Rab11a	90	49.635	MGP_AKRJ_G0029878	Rab35	99	42.512