EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0035314 (Gene tree)
Gene ID: -
Gene Symbol: Rbms3
Alias: 6720477E09Rik|8430436O14Rik
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 1101178 bases
Position: chr9:117705798-118806975
Accession: 2444477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0095159	RRM_1	PF00076.22	1.6e-32	1	2
MGP_AKRJ_P0095159	RRM_1	PF00076.22	1.6e-32	2	2
MGP_AKRJ_P0095156	RRM_1	PF00076.22	1.2e-31	1	2
MGP_AKRJ_P0095156	RRM_1	PF00076.22	1.2e-31	2	2
MGP_AKRJ_P0095153	RRM_1	PF00076.22	1.4e-31	1	2
MGP_AKRJ_P0095153	RRM_1	PF00076.22	1.4e-31	2	2
MGP_AKRJ_P0095151	RRM_1	PF00076.22	1.5e-31	1	2
MGP_AKRJ_P0095151	RRM_1	PF00076.22	1.5e-31	2	2
MGP_AKRJ_P0095155	RRM_1	PF00076.22	1.5e-31	1	2
MGP_AKRJ_P0095155	RRM_1	PF00076.22	1.5e-31	2	2
MGP_AKRJ_P0095150	RRM_1	PF00076.22	1.7e-31	1	2
MGP_AKRJ_P0095150	RRM_1	PF00076.22	1.7e-31	2	2
MGP_AKRJ_P0095154	RRM_1	PF00076.22	2e-31	1	2
MGP_AKRJ_P0095154	RRM_1	PF00076.22	2e-31	2	2
MGP_AKRJ_P0095157	RRM_1	PF00076.22	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0095160	-	1440	-	-	- (aa)	-	-
MGP_AKRJ_T0095161	-	1753	-	-	- (aa)	-	-
MGP_AKRJ_T0095153	-	2166	-	MGP_AKRJ_P0095153	402 (aa)	-	-
MGP_AKRJ_T0095152	-	1626	-	MGP_AKRJ_P0095152	185 (aa)	-	-
MGP_AKRJ_T0095151	-	3317	-	MGP_AKRJ_P0095151	414 (aa)	-	-
MGP_AKRJ_T0095150	-	7906	XM_017313248	MGP_AKRJ_P0095150	431 (aa)	XP_017168737	Q8BWL5
MGP_AKRJ_T0095157	-	585	-	MGP_AKRJ_P0095157	194 (aa)	-	-
MGP_AKRJ_T0095156	-	1986	-	MGP_AKRJ_P0095156	386 (aa)	-	-
MGP_AKRJ_T0095155	-	2236	-	MGP_AKRJ_P0095155	415 (aa)	-	-
MGP_AKRJ_T0095154	-	2128	-	MGP_AKRJ_P0095154	463 (aa)	-	-
MGP_AKRJ_T0095159	-	619	-	MGP_AKRJ_P0095159	206 (aa)	-	-
MGP_AKRJ_T0095158	-	2029	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0035314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0035314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0035314	Rbms3	75	37.079	MGP_AKRJ_G0025277	Celf2	77	39.474
MGP_AKRJ_G0035314	Rbms3	93	36.134	MGP_AKRJ_G0017499	Celf5	57	42.105
MGP_AKRJ_G0035314	Rbms3	83	37.097	MGP_AKRJ_G0028486	Elavl4	70	36.458
MGP_AKRJ_G0035314	Rbms3	99	80.841	MGP_AKRJ_G0025710	Rbms1	96	71.538
MGP_AKRJ_G0035314	Rbms3	77	33.708	MGP_AKRJ_G0023071	Pabpc6	59	34.091
MGP_AKRJ_G0035314	Rbms3	83	80.663	MGP_AKRJ_G0017787	Rbms2	86	66.758
MGP_AKRJ_G0035314	Rbms3	72	40.789	MGP_AKRJ_G0024143	Celf4	68	40.789
MGP_AKRJ_G0035314	Rbms3	81	39.474	MGP_AKRJ_G0027480	Celf3	94	40.278
MGP_AKRJ_G0035314	Rbms3	97	34.356	MGP_AKRJ_G0033245	Elavl1	91	34.356
MGP_AKRJ_G0035314	Rbms3	77	30.818	MGP_AKRJ_G0026771	Pabpc1l	59	30.818
MGP_AKRJ_G0035314	Rbms3	82	42.105	MGP_AKRJ_G0034812	Celf6	52	42.105
MGP_AKRJ_G0035314	Rbms3	70	38.562	MGP_AKRJ_G0034378	Elavl3	63	37.931
MGP_AKRJ_G0035314	Rbms3	83	37.222	MGP_AKRJ_G0028355	Elavl2	69	37.209
MGP_AKRJ_G0035314	Rbms3	68	43.421	MGP_AKRJ_G0026079	Celf1	53	43.421