EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_AKRJ_G0035451 (Gene tree)
Gene ID: -
Gene Symbol: Rbm3
Alias: 2600016C11Rik
Full Name: RNA binding motif protein 3
Gene Type: protein_coding
Species: Mus_musculus_akrj
Status: putative
Strand: Minus strand
Length: 9233 bases
Position: chrX:2874791-2884023
Accession: 1099460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_AKRJ_P0095631	RRM_1	PF00076.22	1.8e-24	1	1
MGP_AKRJ_P0095630	RRM_1	PF00076.22	1.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_AKRJ_T0095632	-	1120	-	MGP_AKRJ_P0095632	90 (aa)	-	-
MGP_AKRJ_T0095633	-	1055	-	MGP_AKRJ_P0095633	90 (aa)	-	-
MGP_AKRJ_T0095630	-	2792	-	MGP_AKRJ_P0095630	154 (aa)	-	-
MGP_AKRJ_T0095631	-	969	-	MGP_AKRJ_P0095631	153 (aa)	-	-
MGP_AKRJ_T0095634	-	1208	-	-	- (aa)	-	-
MGP_AKRJ_T0095635	-	721	-	-	- (aa)	-	-
MGP_AKRJ_T0095629	-	2234	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_AKRJ_G0035451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_AKRJ_G0035451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_AKRJ_G0035451	Rbm3	100	63.529	MGP_AKRJ_G0017425	Cirbp	99	60.588
MGP_AKRJ_G0035451	Rbm3	73	33.333	MGP_AKRJ_G0029998	Snrnp35	55	34.848
MGP_AKRJ_G0035451	Rbm3	82	38.710	MGP_AKRJ_G0028355	Elavl2	63	32.911
MGP_AKRJ_G0035451	Rbm3	90	39.326	MGP_AKRJ_G0017431	Dazap1	78	46.032
MGP_AKRJ_G0035451	Rbm3	79	32.394	MGP_AKRJ_G0023379	-	57	34.211
MGP_AKRJ_G0035451	Rbm3	79	37.931	MGP_AKRJ_G0029692	Hnrnpd	70	34.667
MGP_AKRJ_G0035451	Rbm3	82	43.243	MGP_AKRJ_G0018862	Msi2	61	42.857
MGP_AKRJ_G0035451	Rbm3	78	54.286	MGP_AKRJ_G0033715	-	53	55.556
MGP_AKRJ_G0035451	Rbm3	82	38.710	MGP_AKRJ_G0028486	Elavl4	58	31.646
MGP_AKRJ_G0035451	Rbm3	54	30.120	MGP_AKRJ_G0021827	-	54	31.579
MGP_AKRJ_G0035451	Rbm3	87	40.000	MGP_AKRJ_G0028651	Pabpc4	68	37.500
MGP_AKRJ_G0035451	Rbm3	78	55.714	MGP_AKRJ_G0035651	Rbmx	79	56.790
MGP_AKRJ_G0035451	Rbm3	99	35.955	MGP_AKRJ_G0030872	Tia1	70	41.333
MGP_AKRJ_G0035451	Rbm3	90	35.385	MGP_AKRJ_G0027119	Pabpc4l	83	34.286