EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0015840 (Gene tree)
Gene ID: -
Gene Symbol: Rab23
Alias: AW545388|opb|opb2
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 24350 bases
Position: chr1:30961157-30985506
Accession: 99833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0019120	MMR_HSR1	PF01926.23	1.2e-05	1	1
MGP_BALBcJ_P0019124	MMR_HSR1	PF01926.23	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0019122	-	2047	-	-	- (aa)	-	-
MGP_BALBcJ_T0019123	-	1087	-	-	- (aa)	-	-
MGP_BALBcJ_T0019120	-	4322	-	MGP_BALBcJ_P0019120	237 (aa)	-	-
MGP_BALBcJ_T0019121	-	4398	-	MGP_BALBcJ_P0019121	64 (aa)	-	-
MGP_BALBcJ_T0019126	-	437	-	-	- (aa)	-	-
MGP_BALBcJ_T0019127	-	1764	-	-	- (aa)	-	-
MGP_BALBcJ_T0019124	-	4218	-	MGP_BALBcJ_P0019124	237 (aa)	-	-
MGP_BALBcJ_T0019125	-	1966	-	-	- (aa)	-	-
MGP_BALBcJ_T0019119	-	2557	-	-	- (aa)	-	-
MGP_BALBcJ_T0019118	-	444	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0015840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0015840's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0015840	Rab23	66	37.654	MGP_BALBcJ_G0036076	Rab9b	80	37.654
MGP_BALBcJ_G0015840	Rab23	65	31.410	MGP_BALBcJ_G0031461	Kras	94	32.778
MGP_BALBcJ_G0015840	Rab23	80	30.890	MGP_BALBcJ_G0023938	Rab31	93	30.890
MGP_BALBcJ_G0015840	Rab23	86	32.850	MGP_BALBcJ_G0021255	Rab2b	94	32.850
MGP_BALBcJ_G0015840	Rab23	67	31.765	MGP_BALBcJ_G0030362	Rasl11a	69	31.765
MGP_BALBcJ_G0015840	Rab23	70	33.918	MGP_BALBcJ_G0030984	Rab7	94	43.478
MGP_BALBcJ_G0015840	Rab23	68	33.129	MGP_BALBcJ_G0031568	Rasl2-9	74	33.129
MGP_BALBcJ_G0015840	Rab23	80	32.984	MGP_BALBcJ_G0034916	Rab11a	92	34.752
MGP_BALBcJ_G0015840	Rab23	85	31.683	MGP_BALBcJ_G0027373	Rab25	92	31.683
MGP_BALBcJ_G0015840	Rab23	67	37.500	MGP_BALBcJ_G0017816	Rab5b	74	37.500
MGP_BALBcJ_G0015840	Rab23	64	38.462	MGP_BALBcJ_G0018708	Rab34	60	38.462
MGP_BALBcJ_G0015840	Rab23	61	32.192	MGP_BALBcJ_G0027661	Nras	95	35.862
MGP_BALBcJ_G0015840	Rab23	65	36.538	MGP_BALBcJ_G0035831	Rab39b	73	36.538
MGP_BALBcJ_G0015840	Rab23	66	41.139	MGP_BALBcJ_G0035166	Rab6b	76	41.139
MGP_BALBcJ_G0015840	Rab23	67	38.125	MGP_BALBcJ_G0023849	Rab5a	74	38.125
MGP_BALBcJ_G0015840	Rab23	70	34.337	MGP_BALBcJ_G0018005	Rab1a	81	34.337
MGP_BALBcJ_G0015840	Rab23	75	32.086	MGP_BALBcJ_G0029608	Rasl11b	74	32.086
MGP_BALBcJ_G0015840	Rab23	61	31.507	MGP_BALBcJ_G0033197	Hras	98	30.332
MGP_BALBcJ_G0015840	Rab23	66	39.873	MGP_BALBcJ_G0032559	Rab6a	76	39.873
MGP_BALBcJ_G0015840	Rab23	74	35.227	MGP_BALBcJ_G0019109	Rab5c	81	35.227
MGP_BALBcJ_G0015840	Rab23	65	33.766	MGP_BALBcJ_G0026935	Rab22a	79	33.766
MGP_BALBcJ_G0015840	Rab23	70	34.337	MGP_BALBcJ_G0024659	Rab1b	83	34.337
MGP_BALBcJ_G0015840	Rab23	74	37.500	MGP_BALBcJ_G0032499	Rab30	87	37.500
MGP_BALBcJ_G0015840	Rab23	77	38.172	MGP_BALBcJ_G0017287	Rab36	69	38.172
MGP_BALBcJ_G0015840	Rab23	72	35.465	MGP_BALBcJ_G0024094	Rab18	83	35.465
MGP_BALBcJ_G0015840	Rab23	72	34.682	MGP_BALBcJ_G0019803	Rab15	81	34.682
MGP_BALBcJ_G0015840	Rab23	75	34.831	MGP_BALBcJ_G0029950	Rab35	95	33.684
MGP_BALBcJ_G0015840	Rab23	80	33.508	MGP_BALBcJ_G0023498	Rab11b	88	33.508
MGP_BALBcJ_G0015840	Rab23	65	31.818	MGP_BALBcJ_G0036230	Rab9	81	31.818
MGP_BALBcJ_G0015840	Rab23	65	36.129	MGP_BALBcJ_G0029333	Rheb	84	36.129
MGP_BALBcJ_G0015840	Rab23	77	31.383	MGP_BALBcJ_G0035663	Rab33a	79	31.383
MGP_BALBcJ_G0015840	Rab23	70	34.337	MGP_BALBcJ_G0025624	Rab14	88	35.338
MGP_BALBcJ_G0015840	Rab23	67	35.152	MGP_BALBcJ_G0027170	Rab33b	72	35.152
MGP_BALBcJ_G0015840	Rab23	75	32.961	MGP_BALBcJ_G0019314	Rab37	81	32.961
MGP_BALBcJ_G0015840	Rab23	83	32.487	MGP_BALBcJ_G0028009	Rab2a	95	31.863
MGP_BALBcJ_G0015840	Rab23	69	35.119	MGP_BALBcJ_G0023947	Rab12	57	35.119