EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0015888 (Gene tree)
Gene ID: -
Gene Symbol: Aff3
Alias: 3222402O04Rik|A730046J16|LAF-4|Laf4
Full Name: AF4/FMR2 family%2C member 3
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 488132 bases
Position: chr1:35484445-35972576
Accession: 106927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0019407	AF-4	PF05110.13	0	1	2
MGP_BALBcJ_P0019407	AF-4	PF05110.13	0	2	2
MGP_BALBcJ_P0019408	AF-4	PF05110.13	0	1	2
MGP_BALBcJ_P0019408	AF-4	PF05110.13	0	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0019407	-	5857	XM_006495737	MGP_BALBcJ_P0019407	1229 (aa)	XP_006495800	D3YYI6
MGP_BALBcJ_T0019412	-	665	-	MGP_BALBcJ_P0019412	53 (aa)	-	-
MGP_BALBcJ_T0019410	-	761	-	-	- (aa)	-	-
MGP_BALBcJ_T0019411	-	1646	-	-	- (aa)	-	-
MGP_BALBcJ_T0019409	-	3896	-	MGP_BALBcJ_P0019409	1254 (aa)	-	-
MGP_BALBcJ_T0019408	-	6010	-	MGP_BALBcJ_P0019408	1228 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0015888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0015888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0015888	Aff3	89	60.000	MGP_BALBcJ_G0035744	Aff2	84	57.037
MGP_BALBcJ_G0015888	Aff3	83	35.742	MGP_BALBcJ_G0018229	Aff4	74	57.143