EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0016007 (Gene tree)
Gene ID
-
Gene Symbol
Nop58
Alias
MSSP|Nol5|SIK|SIK similar protein|nop5
Full Name
NOP58 ribonucleoprotein
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Plus strand
Length
34022 bases
Position
chr1:57619448-57653469
Accession
1933184
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0020015NopPF01798.185e-8411
MGP_BALBcJ_P0020019NopPF01798.181.4e-8311
MGP_BALBcJ_P0020027NopPF01798.183.4e-4111
MGP_BALBcJ_P0020028NopPF01798.182.7e-3911
MGP_BALBcJ_P0020015NOP5NTPF08156.131.3e-2311
MGP_BALBcJ_P0020019NOP5NTPF08156.134.1e-2311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0020020-461-MGP_BALBcJ_P002002020 (aa)--
MGP_BALBcJ_T0020021-702-MGP_BALBcJ_P002002160 (aa)--
MGP_BALBcJ_T0020023-891--- (aa)--
MGP_BALBcJ_T0020022-623--- (aa)--
MGP_BALBcJ_T0020018-725--- (aa)--
MGP_BALBcJ_T0020019-9465-MGP_BALBcJ_P0020019536 (aa)--
MGP_BALBcJ_T0020027-638-MGP_BALBcJ_P0020027212 (aa)--
MGP_BALBcJ_T0020026-373-MGP_BALBcJ_P002002659 (aa)--
MGP_BALBcJ_T0020025-714-MGP_BALBcJ_P0020025191 (aa)--
MGP_BALBcJ_T0020024-598-MGP_BALBcJ_P0020024145 (aa)--
MGP_BALBcJ_T0020028-585-MGP_BALBcJ_P0020028194 (aa)--
MGP_BALBcJ_T0020016-639-MGP_BALBcJ_P002001628 (aa)--
MGP_BALBcJ_T0020017-653--- (aa)--
MGP_BALBcJ_T0020014-576--- (aa)--
MGP_BALBcJ_T0020015-1713-MGP_BALBcJ_P0020015444 (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0016007's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0016007's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0016007Nop589345.355MGP_BALBcJ_G0026473-9441.525

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us