EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0016237 (Gene tree)
Gene ID: -
Gene Symbol: Lrrfip1
Alias: AU024550|FLAP (FLI LRR associated protein)|Flap|Fliiap1
Full Name: leucine rich repeat (in FLII) interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 137114 bases
Position: chr1:89374442-89511555
Accession: 1342770
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0021198	LRRFIP	PF09738.9	7.9e-106	1	1
MGP_BALBcJ_P0021203	LRRFIP	PF09738.9	1.7e-90	1	3
MGP_BALBcJ_P0021203	LRRFIP	PF09738.9	1.7e-90	2	3
MGP_BALBcJ_P0021203	LRRFIP	PF09738.9	1.7e-90	3	3
MGP_BALBcJ_P0021202	LRRFIP	PF09738.9	7e-90	1	2
MGP_BALBcJ_P0021202	LRRFIP	PF09738.9	7e-90	2	2
MGP_BALBcJ_P0021199	LRRFIP	PF09738.9	1.2e-89	1	2
MGP_BALBcJ_P0021199	LRRFIP	PF09738.9	1.2e-89	2	2
MGP_BALBcJ_P0021200	LRRFIP	PF09738.9	1e-84	1	1
MGP_BALBcJ_P0021197	LRRFIP	PF09738.9	3.6e-82	1	3
MGP_BALBcJ_P0021197	LRRFIP	PF09738.9	3.6e-82	2	3
MGP_BALBcJ_P0021197	LRRFIP	PF09738.9	3.6e-82	3	3
MGP_BALBcJ_P0021196	LRRFIP	PF09738.9	6.8e-66	1	2
MGP_BALBcJ_P0021196	LRRFIP	PF09738.9	6.8e-66	2	2
MGP_BALBcJ_P0021201	LRRFIP	PF09738.9	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0021200	-	3639	-	MGP_BALBcJ_P0021200	729 (aa)	-	-
MGP_BALBcJ_T0021201	-	447	-	MGP_BALBcJ_P0021201	98 (aa)	-	-
MGP_BALBcJ_T0021202	-	2760	-	MGP_BALBcJ_P0021202	628 (aa)	-	-
MGP_BALBcJ_T0021203	-	2155	-	MGP_BALBcJ_P0021203	663 (aa)	-	-
MGP_BALBcJ_T0021204	-	2859	-	MGP_BALBcJ_P0021204	786 (aa)	-	-
MGP_BALBcJ_T0021205	-	587	-	-	- (aa)	-	-
MGP_BALBcJ_T0021206	-	2550	-	-	- (aa)	-	-
MGP_BALBcJ_T0021207	-	215	-	-	- (aa)	-	-
MGP_BALBcJ_T0021208	-	483	-	-	- (aa)	-	-
MGP_BALBcJ_T0021196	-	1031	XM_006529175	MGP_BALBcJ_P0021196	323 (aa)	XP_006529238	Q3UZ39
MGP_BALBcJ_T0021197	-	1747	-	MGP_BALBcJ_P0021197	575 (aa)	-	-
MGP_BALBcJ_T0021198	-	2050	-	MGP_BALBcJ_P0021198	428 (aa)	-	-
MGP_BALBcJ_T0021199	-	2879	-	MGP_BALBcJ_P0021199	638 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0016237's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0016237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0016237	Lrrfip1	99	60.890	MGP_BALBcJ_G0035346	Lrrfip2	100	67.630