EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0016355 (Gene tree)
Gene ID: -
Gene Symbol: Ddx18
Alias: 2310005B10Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 14236 bases
Position: chr1:120204312-120218547
Accession: 1914192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0021730	ResIII	PF04851.15	3e-05	1	1
MGP_BALBcJ_P0021730	DEAD	PF00270.29	1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0021730	-	2258	XM_006529794	MGP_BALBcJ_P0021730	660 (aa)	XP_006529857	Q8K363
MGP_BALBcJ_T0021731	-	622	-	-	- (aa)	-	-
MGP_BALBcJ_T0021732	-	512	-	MGP_BALBcJ_P0021732	170 (aa)	-	-
MGP_BALBcJ_T0021733	-	451	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0016355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0016355's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0016355	Ddx18	50	33.429	MGP_BALBcJ_G0020552	Ddx41	54	33.429
MGP_BALBcJ_G0016355	Ddx18	64	31.403	MGP_BALBcJ_G0029984	Ddx54	50	31.473
MGP_BALBcJ_G0016355	Ddx18	53	30.155	MGP_BALBcJ_G0017959	Ddx56	92	33.333
MGP_BALBcJ_G0016355	Ddx18	53	32.620	MGP_BALBcJ_G0016858	D1Pas1	56	32.620
MGP_BALBcJ_G0016355	Ddx18	53	32.102	MGP_BALBcJ_G0016484	Ddx59	55	32.102
MGP_BALBcJ_G0016355	Ddx18	65	35.529	MGP_BALBcJ_G0025506	Ddx31	72	35.529
MGP_BALBcJ_G0016355	Ddx18	57	34.351	MGP_BALBcJ_G0017241	Ddx50	61	32.867
MGP_BALBcJ_G0016355	Ddx18	68	35.699	MGP_BALBcJ_G0030076	Ddx55	77	35.551
MGP_BALBcJ_G0016355	Ddx18	56	34.456	MGP_BALBcJ_G0035037	Ddx43	55	34.545
MGP_BALBcJ_G0016355	Ddx18	66	45.103	MGP_BALBcJ_G0034780	Ddx10	50	45.103
MGP_BALBcJ_G0016355	Ddx18	55	37.705	MGP_BALBcJ_G0031394	Ddx47	88	37.705
MGP_BALBcJ_G0016355	Ddx18	55	33.071	MGP_BALBcJ_G0018803	Ddx52	68	31.991
MGP_BALBcJ_G0016355	Ddx18	50	31.722	MGP_BALBcJ_G0018486	Eif4a1	90	31.034
MGP_BALBcJ_G0016355	Ddx18	53	32.620	MGP_BALBcJ_G0035542	Ddx3x	56	32.888
MGP_BALBcJ_G0016355	Ddx18	61	37.740	MGP_BALBcJ_G0026882	Ddx27	53	37.500
MGP_BALBcJ_G0016355	Ddx18	51	32.456	MGP_BALBcJ_G0022044	Ddx17	52	32.456
MGP_BALBcJ_G0016355	Ddx18	50	32.239	MGP_BALBcJ_G0019255	Ddx5	74	30.719
MGP_BALBcJ_G0016355	Ddx18	56	35.356	MGP_BALBcJ_G0033678	Ddx49	92	37.160