EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0016539 (Gene tree)
Gene ID: -
Gene Symbol: Dhx9
Alias: AI326842|Ddx9|HEL-5|NDH II|NDHII|RHA|RNA helicase|leukophysin|mHEL-5|nuclear DNA helicase II
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 9
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 31904 bases
Position: chr1:152451992-152483895
Accession: 108177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0022619	dsrm	PF00035.26	9.9e-27	1	2
MGP_BALBcJ_P0022619	dsrm	PF00035.26	9.9e-27	2	2
MGP_BALBcJ_P0022616	dsrm	PF00035.26	3.7e-26	1	2
MGP_BALBcJ_P0022616	dsrm	PF00035.26	3.7e-26	2	2
MGP_BALBcJ_P0022615	dsrm	PF00035.26	3.7e-26	1	2
MGP_BALBcJ_P0022615	dsrm	PF00035.26	3.7e-26	2	2
MGP_BALBcJ_P0022619	DEAD	PF00270.29	2.4e-06	1	1
MGP_BALBcJ_P0022615	DEAD	PF00270.29	7.7e-06	1	1
MGP_BALBcJ_P0022616	DEAD	PF00270.29	7.8e-06	1	1
MGP_BALBcJ_P0022615	HA2	PF04408.23	1.2e-14	1	1
MGP_BALBcJ_P0022616	HA2	PF04408.23	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0022620	-	658	-	-	- (aa)	-	-
MGP_BALBcJ_T0022621	-	2658	-	-	- (aa)	-	-
MGP_BALBcJ_T0022623	-	1604	-	-	- (aa)	-	-
MGP_BALBcJ_T0022622	-	2274	-	-	- (aa)	-	-
MGP_BALBcJ_T0022618	-	2018	-	MGP_BALBcJ_P0022618	46 (aa)	-	-
MGP_BALBcJ_T0022619	-	2346	-	MGP_BALBcJ_P0022619	735 (aa)	-	-
MGP_BALBcJ_T0022616	-	4616	-	MGP_BALBcJ_P0022616	1384 (aa)	-	-
MGP_BALBcJ_T0022617	-	2406	-	MGP_BALBcJ_P0022617	459 (aa)	-	-
MGP_BALBcJ_T0022615	-	4561	XM_011247918	MGP_BALBcJ_P0022615	1383 (aa)	XP_011246220	A0A087WPL5

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0016539	Dhx9	56	47.685	MGP_BALBcJ_G0024369	Ythdc2	90	35.912
MGP_BALBcJ_G0016539	Dhx9	54	32.518	MGP_BALBcJ_G0026776	Dhx35	52	31.051
MGP_BALBcJ_G0016539	Dhx9	54	35.915	MGP_BALBcJ_G0024019	Dhx57	63	35.681
MGP_BALBcJ_G0016539	Dhx9	53	38.034	MGP_BALBcJ_G0027232	Dhx36	76	37.613
MGP_BALBcJ_G0016539	Dhx9	52	40.153	MGP_BALBcJ_G0035317	Dhx30	62	32.861
MGP_BALBcJ_G0016539	Dhx9	58	32.593	MGP_BALBcJ_G0020892	Dhx29	65	31.655