EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0017241 (Gene tree)
Gene ID: -
Gene Symbol: Ddx50
Alias: 4933429B04Rik|8430408E17Rik|GU2|RH-II|RH-II/Gubeta
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 50
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 35339 bases
Position: chr10:60241152-60276490
Accession: 2182303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0025406	GUCT	PF08152.12	4.8e-28	1	1
MGP_BALBcJ_P0025406	ResIII	PF04851.15	5.8e-10	1	1
MGP_BALBcJ_P0025406	DEAD	PF00270.29	1.9e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0025406	-	2527	XM_006514345	MGP_BALBcJ_P0025406	734 (aa)	XP_006514408	Q99MJ9
MGP_BALBcJ_T0025407	-	2201	-	MGP_BALBcJ_P0025407	669 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0017241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0017241's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0017241	Ddx50	51	34.302	MGP_BALBcJ_G0019255	Ddx5	70	33.446
MGP_BALBcJ_G0017241	Ddx50	54	31.383	MGP_BALBcJ_G0016858	D1Pas1	56	32.181
MGP_BALBcJ_G0017241	Ddx50	54	31.383	MGP_BALBcJ_G0035542	Ddx3x	52	33.239
MGP_BALBcJ_G0017241	Ddx50	61	30.676	MGP_BALBcJ_G0031394	Ddx47	94	30.175
MGP_BALBcJ_G0017241	Ddx50	53	32.603	MGP_BALBcJ_G0020552	Ddx41	57	32.603
MGP_BALBcJ_G0017241	Ddx50	55	32.267	MGP_BALBcJ_G0018486	Eif4a1	88	31.720
MGP_BALBcJ_G0017241	Ddx50	54	33.962	MGP_BALBcJ_G0022044	Ddx17	55	33.962
MGP_BALBcJ_G0017241	Ddx50	61	34.272	MGP_BALBcJ_G0026882	Ddx27	52	34.129
MGP_BALBcJ_G0017241	Ddx50	55	32.353	MGP_BALBcJ_G0019421	Eif4a3	86	32.353
MGP_BALBcJ_G0017241	Ddx50	53	33.799	MGP_BALBcJ_G0035037	Ddx43	54	33.799
MGP_BALBcJ_G0017241	Ddx50	61	32.867	MGP_BALBcJ_G0016355	Ddx18	57	34.351
MGP_BALBcJ_G0017241	Ddx50	90	66.446	MGP_BALBcJ_G0017240	Ddx21	71	64.217
MGP_BALBcJ_G0017241	Ddx50	51	31.304	MGP_BALBcJ_G0022645	Eif4a2	90	31.304