EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0017327 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 198138 bases
Position: chr10:74563352-74761489
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0025800	KH_1	PF00013.29	2.9e-55	1	3
MGP_BALBcJ_P0025800	KH_1	PF00013.29	2.9e-55	2	3
MGP_BALBcJ_P0025800	KH_1	PF00013.29	2.9e-55	3	3
MGP_BALBcJ_P0025797	KH_1	PF00013.29	3e-55	1	3
MGP_BALBcJ_P0025797	KH_1	PF00013.29	3e-55	2	3
MGP_BALBcJ_P0025797	KH_1	PF00013.29	3e-55	3	3
MGP_BALBcJ_P0025799	KH_1	PF00013.29	3e-55	1	3
MGP_BALBcJ_P0025799	KH_1	PF00013.29	3e-55	2	3
MGP_BALBcJ_P0025799	KH_1	PF00013.29	3e-55	3	3
MGP_BALBcJ_P0025802	KH_1	PF00013.29	7.7e-19	1	1
MGP_BALBcJ_P0025800	KH_2	PF07650.17	3.9e-15	1	1
MGP_BALBcJ_P0025797	KH_2	PF07650.17	3.9e-15	1	1
MGP_BALBcJ_P0025799	KH_2	PF07650.17	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0025804	-	717	-	-	- (aa)	-	-
MGP_BALBcJ_T0025805	-	337	-	-	- (aa)	-	-
MGP_BALBcJ_T0025802	-	605	-	MGP_BALBcJ_P0025802	160 (aa)	-	-
MGP_BALBcJ_T0025803	-	944	-	MGP_BALBcJ_P0025803	226 (aa)	-	-
MGP_BALBcJ_T0025800	-	2544	-	MGP_BALBcJ_P0025800	370 (aa)	-	-
MGP_BALBcJ_T0025801	-	1095	-	-	- (aa)	-	-
MGP_BALBcJ_T0025798	-	1736	-	-	- (aa)	-	-
MGP_BALBcJ_T0025799	-	1748	-	MGP_BALBcJ_P0025799	371 (aa)	-	-
MGP_BALBcJ_T0025796	-	2410	XM_006513916	MGP_BALBcJ_P0025796	394 (aa)	XP_006513979	P57722
MGP_BALBcJ_T0025797	-	2013	-	MGP_BALBcJ_P0025797	371 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0017327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0017327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0017327	Pcbp3	66	33.582	MGP_BALBcJ_G0018934	Igf2bp1	60	33.333
MGP_BALBcJ_G0017327	Pcbp3	89	36.765	MGP_BALBcJ_G0022632	Igf2bp2	62	33.333
MGP_BALBcJ_G0017327	Pcbp3	99	65.873	MGP_BALBcJ_G0030957	Pcbp1	99	68.033
MGP_BALBcJ_G0017327	Pcbp3	99	82.143	MGP_BALBcJ_G0022381	Pcbp2	99	78.338
MGP_BALBcJ_G0017327	Pcbp3	66	31.250	MGP_BALBcJ_G0027959	Fubp1	71	33.019
MGP_BALBcJ_G0017327	Pcbp3	79	41.667	MGP_BALBcJ_G0020583	Hnrnpk	77	50.633
MGP_BALBcJ_G0017327	Pcbp3	85	31.973	MGP_BALBcJ_G0025560	Fubp3	77	31.973
MGP_BALBcJ_G0017327	Pcbp3	86	35.000	MGP_BALBcJ_G0030702	Igf2bp3	59	33.813
MGP_BALBcJ_G0017327	Pcbp3	85	69.811	MGP_BALBcJ_G0035205	Pcbp4	93	70.652
MGP_BALBcJ_G0017327	Pcbp3	72	40.351	MGP_BALBcJ_G0019656	Nova1	59	40.351