EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0017816 (Gene tree)
Gene ID: -
Gene Symbol: Rab5b
Alias: C030027M18Rik
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 20086 bases
Position: chr10:127492809-127512894
Accession: 105938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0027484	MMR_HSR1	PF01926.23	0.00026	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0027484	-	3171	XM_006513384	MGP_BALBcJ_P0027484	215 (aa)	XP_006513447	P61021

Gene Model

Click here to download MGP_BALBcJ_G0017816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0017816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0017816	Rab5b	77	32.335	MGP_BALBcJ_G0031461	Kras	88	32.335
MGP_BALBcJ_G0017816	Rab5b	83	37.705	MGP_BALBcJ_G0035663	Rab33a	77	37.705
MGP_BALBcJ_G0017816	Rab5b	78	42.442	MGP_BALBcJ_G0030984	Rab7	90	49.296
MGP_BALBcJ_G0017816	Rab5b	74	37.195	MGP_BALBcJ_G0022206	Rabl2	72	37.195
MGP_BALBcJ_G0017816	Rab5b	80	33.333	MGP_BALBcJ_G0031568	Rasl2-9	76	33.333
MGP_BALBcJ_G0017816	Rab5b	93	32.273	MGP_BALBcJ_G0036230	Rab9	99	32.273
MGP_BALBcJ_G0017816	Rab5b	86	40.761	MGP_BALBcJ_G0021255	Rab2b	85	40.761
MGP_BALBcJ_G0017816	Rab5b	75	45.963	MGP_BALBcJ_G0027373	Rab25	76	45.963
MGP_BALBcJ_G0017816	Rab5b	84	30.220	MGP_BALBcJ_G0027661	Nras	99	33.333
MGP_BALBcJ_G0017816	Rab5b	75	44.720	MGP_BALBcJ_G0025624	Rab14	89	41.481
MGP_BALBcJ_G0017816	Rab5b	75	47.205	MGP_BALBcJ_G0023498	Rab11b	74	47.205
MGP_BALBcJ_G0017816	Rab5b	90	47.938	MGP_BALBcJ_G0026935	Rab22a	98	47.938
MGP_BALBcJ_G0017816	Rab5b	62	30.986	MGP_BALBcJ_G0031082	Arl8b	73	30.986
MGP_BALBcJ_G0017816	Rab5b	82	33.333	MGP_BALBcJ_G0029333	Rheb	93	33.333
MGP_BALBcJ_G0017816	Rab5b	77	45.181	MGP_BALBcJ_G0032559	Rab6a	80	45.181
MGP_BALBcJ_G0017816	Rab5b	90	35.323	MGP_BALBcJ_G0036076	Rab9b	97	35.323
MGP_BALBcJ_G0017816	Rab5b	94	41.827	MGP_BALBcJ_G0019314	Rab37	93	41.827
MGP_BALBcJ_G0017816	Rab5b	77	45.783	MGP_BALBcJ_G0035166	Rab6b	80	45.783
MGP_BALBcJ_G0017816	Rab5b	97	86.124	MGP_BALBcJ_G0019109	Rab5c	97	86.124
MGP_BALBcJ_G0017816	Rab5b	90	43.367	MGP_BALBcJ_G0018005	Rab1a	95	43.367
MGP_BALBcJ_G0017816	Rab5b	55	30.159	MGP_BALBcJ_G0019643	Arl4a	60	30.159
MGP_BALBcJ_G0017816	Rab5b	75	47.205	MGP_BALBcJ_G0034916	Rab11a	88	48.889
MGP_BALBcJ_G0017816	Rab5b	90	37.949	MGP_BALBcJ_G0029950	Rab35	96	37.949
MGP_BALBcJ_G0017816	Rab5b	82	36.932	MGP_BALBcJ_G0019803	Rab15	83	36.932
MGP_BALBcJ_G0017816	Rab5b	82	45.198	MGP_BALBcJ_G0024659	Rab1b	87	45.198
MGP_BALBcJ_G0017816	Rab5b	74	37.500	MGP_BALBcJ_G0015840	Rab23	67	37.500
MGP_BALBcJ_G0017816	Rab5b	73	35.000	MGP_BALBcJ_G0017287	Rab36	60	35.000
MGP_BALBcJ_G0017816	Rab5b	90	38.462	MGP_BALBcJ_G0024094	Rab18	93	38.462
MGP_BALBcJ_G0017816	Rab5b	82	32.787	MGP_BALBcJ_G0033197	Hras	96	32.787
MGP_BALBcJ_G0017816	Rab5b	82	39.344	MGP_BALBcJ_G0027170	Rab33b	79	39.130
MGP_BALBcJ_G0017816	Rab5b	85	35.326	MGP_BALBcJ_G0023947	Rab12	63	35.326
MGP_BALBcJ_G0017816	Rab5b	78	42.857	MGP_BALBcJ_G0032499	Rab30	83	42.857
MGP_BALBcJ_G0017816	Rab5b	78	35.882	MGP_BALBcJ_G0035831	Rab39b	80	35.882
MGP_BALBcJ_G0017816	Rab5b	100	81.860	MGP_BALBcJ_G0023849	Rab5a	100	81.860
MGP_BALBcJ_G0017816	Rab5b	91	47.959	MGP_BALBcJ_G0023938	Rab31	98	47.959
MGP_BALBcJ_G0017816	Rab5b	62	30.986	MGP_BALBcJ_G0016460	Arl8a	73	30.986
MGP_BALBcJ_G0017816	Rab5b	91	37.949	MGP_BALBcJ_G0028009	Rab2a	76	43.478