EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018147 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 9659 bases
Position: chr11:46201582-46211240
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0028683	MMR_HSR1	PF01926.23	5.6e-05	1	1
MGP_BALBcJ_P0028682	MMR_HSR1	PF01926.23	9.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0028683	-	1213	-	MGP_BALBcJ_P0028683	288 (aa)	-	-
MGP_BALBcJ_T0028682	-	2259	-	MGP_BALBcJ_P0028682	409 (aa)	-	-
MGP_BALBcJ_T0028681	-	3832	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0018147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018147	Irgm1	82	39.095	MGP_BALBcJ_G0018153	-	76	45.000
MGP_BALBcJ_G0018147	Irgm1	89	56.031	MGP_BALBcJ_G0018286	Igtp	90	49.740
MGP_BALBcJ_G0018147	Irgm1	76	35.169	MGP_BALBcJ_G0031813	Irgc1	71	30.183
MGP_BALBcJ_G0018147	Irgm1	75	33.028	MGP_BALBcJ_G0024425	F830016B08Rik	78	33.028
MGP_BALBcJ_G0018147	Irgm1	86	34.118	MGP_BALBcJ_G0024424	Gm4841	89	31.989
MGP_BALBcJ_G0018147	Irgm1	83	62.185	MGP_BALBcJ_G0018287	Irgm2	92	50.135
MGP_BALBcJ_G0018147	Irgm1	82	39.095	MGP_BALBcJ_G0018154	Tgtp1	72	36.667
MGP_BALBcJ_G0018147	Irgm1	89	31.937	MGP_BALBcJ_G0018155	Ifi47	91	31.937
MGP_BALBcJ_G0018147	Irgm1	85	37.698	MGP_BALBcJ_G0018148	-	70	37.698
MGP_BALBcJ_G0018147	Irgm1	93	33.696	MGP_BALBcJ_G0024426	Iigp1	79	32.515
MGP_BALBcJ_G0018147	Irgm1	79	36.864	MGP_BALBcJ_G0028076	Gm4951	77	33.013