EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018153 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 11202 bases
Position: chr11:46432440-46443641
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0028693	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_BALBcJ_P0028691	MMR_HSR1	PF01926.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0028691	-	2823	-	MGP_BALBcJ_P0028691	415 (aa)	-	-
MGP_BALBcJ_T0028693	-	764	-	MGP_BALBcJ_P0028693	132 (aa)	-	-
MGP_BALBcJ_T0028694	-	373	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0018153's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018153's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018153	-	76	45.000	MGP_BALBcJ_G0018147	Irgm1	82	39.095
MGP_BALBcJ_G0018153	-	90	50.833	MGP_BALBcJ_G0018148	-	93	46.884
MGP_BALBcJ_G0018153	-	90	50.833	MGP_BALBcJ_G0018149	-	82	54.000
MGP_BALBcJ_G0018153	-	68	45.556	MGP_BALBcJ_G0018287	Irgm2	71	35.254
MGP_BALBcJ_G0018153	-	76	41.584	MGP_BALBcJ_G0018286	Igtp	65	32.872
MGP_BALBcJ_G0018153	-	91	43.008	MGP_BALBcJ_G0018155	Ifi47	90	43.008
MGP_BALBcJ_G0018153	-	100	100.000	MGP_BALBcJ_G0018154	Tgtp1	100	100.000
MGP_BALBcJ_G0018153	-	97	50.781	MGP_BALBcJ_G0024424	Gm4841	94	47.315
MGP_BALBcJ_G0018153	-	98	56.589	MGP_BALBcJ_G0024425	F830016B08Rik	93	46.310
MGP_BALBcJ_G0018153	-	97	54.688	MGP_BALBcJ_G0024426	Iigp1	95	46.193
MGP_BALBcJ_G0018153	-	85	42.857	MGP_BALBcJ_G0031813	Irgc1	82	34.987
MGP_BALBcJ_G0018153	-	98	48.837	MGP_BALBcJ_G0028076	Gm4951	96	44.304