EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018193 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 14907 bases
Position: chr11:48443418-48458324
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	1	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	2	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	3	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	4	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	5	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	6	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	7	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	8	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	9	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	10	11
MGP_BALBcJ_P0028840	zf-C2H2	PF00096.26	7.8e-63	11	11
MGP_BALBcJ_P0028840	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0028841	-	579	-	-	- (aa)	-	-
MGP_BALBcJ_T0028840	-	2111	XM_006533208	MGP_BALBcJ_P0028840	536 (aa)	XP_006533271	Q5NCH5
MGP_BALBcJ_T0028843	-	606	-	-	- (aa)	-	-
MGP_BALBcJ_T0028842	-	722	-	MGP_BALBcJ_P0028842	122 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0018193's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018193	Zfp454	75	42.982	MGP_BALBcJ_G0024567	Zfp236	63	42.697
MGP_BALBcJ_G0018193	Zfp454	69	59.091	MGP_BALBcJ_G0031806	-	98	59.091
MGP_BALBcJ_G0018193	Zfp454	98	48.725	MGP_BALBcJ_G0031800	Zfp112	72	57.143
MGP_BALBcJ_G0018193	Zfp454	82	57.778	MGP_BALBcJ_G0031801	Zfp235	78	57.778
MGP_BALBcJ_G0018193	Zfp454	98	50.523	MGP_BALBcJ_G0031808	Zfp94	97	50.523
MGP_BALBcJ_G0018193	Zfp454	67	51.309	MGP_BALBcJ_G0031550	Zfp628	60	49.451
MGP_BALBcJ_G0018193	Zfp454	70	41.854	MGP_BALBcJ_G0023223	Zscan10	75	44.554
MGP_BALBcJ_G0018193	Zfp454	69	37.600	MGP_BALBcJ_G0033958	Zfp319	91	37.989
MGP_BALBcJ_G0018193	Zfp454	67	42.623	MGP_BALBcJ_G0031558	Zfp865	80	36.486
MGP_BALBcJ_G0018193	Zfp454	66	48.148	MGP_BALBcJ_G0031559	-	68	36.486
MGP_BALBcJ_G0018193	Zfp454	87	48.199	MGP_BALBcJ_G0032107	Zfp715	61	57.778
MGP_BALBcJ_G0018193	Zfp454	98	46.667	MGP_BALBcJ_G0034450	Zfp872	99	46.667
MGP_BALBcJ_G0018193	Zfp454	99	53.604	MGP_BALBcJ_G0021980	Zfp251	95	51.948
MGP_BALBcJ_G0018193	Zfp454	68	38.320	MGP_BALBcJ_G0018290	Zfp672	90	42.029
MGP_BALBcJ_G0018193	Zfp454	98	47.879	MGP_BALBcJ_G0018339	Zfp867	96	49.583
MGP_BALBcJ_G0018193	Zfp454	69	39.130	MGP_BALBcJ_G0018928	Zfp652	56	38.596
MGP_BALBcJ_G0018193	Zfp454	99	49.315	MGP_BALBcJ_G0023192	Zfp677	99	49.315
MGP_BALBcJ_G0018193	Zfp454	100	47.570	MGP_BALBcJ_G0023194	Zfp51	95	60.714
MGP_BALBcJ_G0018193	Zfp454	98	48.828	MGP_BALBcJ_G0034117	Zfp1	99	48.828
MGP_BALBcJ_G0018193	Zfp454	81	53.521	MGP_BALBcJ_G0032098	-	59	55.556
MGP_BALBcJ_G0018193	Zfp454	98	52.692	MGP_BALBcJ_G0020652	Zfp759	100	52.692
MGP_BALBcJ_G0018193	Zfp454	98	42.508	MGP_BALBcJ_G0026868	Zfp334	99	44.615
MGP_BALBcJ_G0018193	Zfp454	70	53.535	MGP_BALBcJ_G0020223	Zkscan4	52	53.535
MGP_BALBcJ_G0018193	Zfp454	73	48.663	MGP_BALBcJ_G0031910	Zfp974	90	49.858
MGP_BALBcJ_G0018193	Zfp454	76	53.448	MGP_BALBcJ_G0031807	Zfp61	60	66.667
MGP_BALBcJ_G0018193	Zfp454	99	46.361	MGP_BALBcJ_G0023214	Zfp945	99	46.479
MGP_BALBcJ_G0018193	Zfp454	71	57.803	MGP_BALBcJ_G0031974	Zfp420	98	59.532
MGP_BALBcJ_G0018193	Zfp454	86	52.000	MGP_BALBcJ_G0020651	Rslcan18	87	52.000
MGP_BALBcJ_G0018193	Zfp454	98	41.509	MGP_BALBcJ_G0033744	Zfp882	99	44.110
MGP_BALBcJ_G0018193	Zfp454	66	49.112	MGP_BALBcJ_G0033743	Zfp709	89	49.112
MGP_BALBcJ_G0018193	Zfp454	65	42.424	MGP_BALBcJ_G0029032	Zbtb17	55	43.322
MGP_BALBcJ_G0018193	Zfp454	68	42.262	MGP_BALBcJ_G0029820	Gfi1	100	45.794
MGP_BALBcJ_G0018193	Zfp454	65	36.493	MGP_BALBcJ_G0031561	Zfp784	71	36.493
MGP_BALBcJ_G0018193	Zfp454	100	55.556	MGP_BALBcJ_G0026439	Zfp661	98	55.405
MGP_BALBcJ_G0018193	Zfp454	69	60.345	MGP_BALBcJ_G0031158	Zfp637	80	55.208
MGP_BALBcJ_G0018193	Zfp454	68	51.095	MGP_BALBcJ_G0033020	Zfp768	51	50.523
MGP_BALBcJ_G0018193	Zfp454	65	47.423	MGP_BALBcJ_G0029484	Zbtb49	63	50.000
MGP_BALBcJ_G0018193	Zfp454	68	38.571	MGP_BALBcJ_G0030812	Prdm5	78	38.571
MGP_BALBcJ_G0018193	Zfp454	70	35.714	MGP_BALBcJ_G0031839	Zfp574	88	37.500
MGP_BALBcJ_G0018193	Zfp454	82	36.599	MGP_BALBcJ_G0030681	Repin1	92	35.252
MGP_BALBcJ_G0018193	Zfp454	98	50.167	MGP_BALBcJ_G0031805	Zfp108	99	50.696
MGP_BALBcJ_G0018193	Zfp454	68	45.745	MGP_BALBcJ_G0026906	Zfp64	73	35.125