EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018526 (Gene tree)
Gene ID: -
Gene Symbol: Bcl6b
Alias: Bazf
Full Name: B cell CLL/lymphoma 6%2C member B
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 5671 bases
Position: chr11:68378759-68384429
Accession: 1278332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0030165	zf-C2H2	PF00096.26	6.8e-16	1	2
MGP_BALBcJ_P0030165	zf-C2H2	PF00096.26	6.8e-16	2	2
MGP_BALBcJ_P0030165	zf-met	PF12874.7	9.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0030167	-	652	-	-	- (aa)	-	-
MGP_BALBcJ_T0030166	-	384	-	MGP_BALBcJ_P0030166	116 (aa)	-	-
MGP_BALBcJ_T0030165	-	3366	-	MGP_BALBcJ_P0030165	474 (aa)	-	O88282

Gene Model

Click here to download MGP_BALBcJ_G0018526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018526	Bcl6b	54	47.368	MGP_BALBcJ_G0029484	Zbtb49	60	45.714
MGP_BALBcJ_G0018526	Bcl6b	62	47.368	MGP_BALBcJ_G0023194	Zfp51	82	47.368
MGP_BALBcJ_G0018526	Bcl6b	68	45.312	MGP_BALBcJ_G0029032	Zbtb17	74	44.444
MGP_BALBcJ_G0018526	Bcl6b	96	52.713	MGP_BALBcJ_G0022655	Bcl6	69	52.756
MGP_BALBcJ_G0018526	Bcl6b	63	46.324	MGP_BALBcJ_G0023214	Zfp945	78	46.324
MGP_BALBcJ_G0018526	Bcl6b	97	34.483	MGP_BALBcJ_G0025666	Zbtb6	97	34.483
MGP_BALBcJ_G0018526	Bcl6b	94	40.299	MGP_BALBcJ_G0017111	Zbtb24	71	37.640
MGP_BALBcJ_G0018526	Bcl6b	51	46.099	MGP_BALBcJ_G0020223	Zkscan4	60	46.099
MGP_BALBcJ_G0018526	Bcl6b	96	32.692	MGP_BALBcJ_G0020928	Zfp131	50	36.667
MGP_BALBcJ_G0018526	Bcl6b	54	48.148	MGP_BALBcJ_G0020652	Zfp759	88	48.148
MGP_BALBcJ_G0018526	Bcl6b	92	41.176	MGP_BALBcJ_G0023956	Zbtb14	94	41.176
MGP_BALBcJ_G0018526	Bcl6b	82	38.739	MGP_BALBcJ_G0022793	Zbtb20	61	38.739
MGP_BALBcJ_G0018526	Bcl6b	56	49.645	MGP_BALBcJ_G0027094	Mynn	86	49.645