EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018803 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 23523 bases
Position: chr11:82472977-82496499
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0031247	ResIII	PF04851.15	9.9e-06	1	1
MGP_BALBcJ_P0031247	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0031248	-	553	-	-	- (aa)	-	-
MGP_BALBcJ_T0031247	-	3194	-	MGP_BALBcJ_P0031247	598 (aa)	-	Q8K301

Gene Model

Click here to download MGP_BALBcJ_G0018803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018803	Ddx52	60	31.768	MGP_BALBcJ_G0018486	Eif4a1	87	31.768
MGP_BALBcJ_G0018803	Ddx52	69	34.135	MGP_BALBcJ_G0035037	Ddx43	63	34.135
MGP_BALBcJ_G0018803	Ddx52	68	30.456	MGP_BALBcJ_G0022044	Ddx17	62	30.843
MGP_BALBcJ_G0018803	Ddx52	70	32.045	MGP_BALBcJ_G0035542	Ddx3x	61	32.530
MGP_BALBcJ_G0018803	Ddx52	51	39.080	MGP_BALBcJ_G0022645	Eif4a2	75	39.080
MGP_BALBcJ_G0018803	Ddx52	68	31.991	MGP_BALBcJ_G0016355	Ddx18	55	33.071
MGP_BALBcJ_G0018803	Ddx52	60	41.071	MGP_BALBcJ_G0019548	Ddx1	55	41.071
MGP_BALBcJ_G0018803	Ddx52	73	32.648	MGP_BALBcJ_G0016484	Ddx59	64	33.741
MGP_BALBcJ_G0018803	Ddx52	68	30.733	MGP_BALBcJ_G0020552	Ddx41	65	31.026
MGP_BALBcJ_G0018803	Ddx52	58	33.428	MGP_BALBcJ_G0031394	Ddx47	83	32.011
MGP_BALBcJ_G0018803	Ddx52	66	31.204	MGP_BALBcJ_G0019255	Ddx5	74	31.204
MGP_BALBcJ_G0018803	Ddx52	62	30.750	MGP_BALBcJ_G0030076	Ddx55	61	30.750
MGP_BALBcJ_G0018803	Ddx52	66	32.530	MGP_BALBcJ_G0016858	D1Pas1	61	32.530
MGP_BALBcJ_G0018803	Ddx52	61	30.597	MGP_BALBcJ_G0017959	Ddx56	80	33.493
MGP_BALBcJ_G0018803	Ddx52	70	30.222	MGP_BALBcJ_G0022270	Ddx23	54	30.243
MGP_BALBcJ_G0018803	Ddx52	58	30.900	MGP_BALBcJ_G0029867	Ddx51	64	30.900
MGP_BALBcJ_G0018803	Ddx52	61	30.081	MGP_BALBcJ_G0033678	Ddx49	76	30.081
MGP_BALBcJ_G0018803	Ddx52	66	34.069	MGP_BALBcJ_G0020888	Ddx4	57	34.069