EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018846 (Gene tree)
Gene ID: -
Gene Symbol: Sept4
Alias: ARTS|Bh5|OTTMUSG00000001265|Pnutl2|cell division control-related protein 2b|septin H5
Full Name: septin 4
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 22635 bases
Position: chr11:86148966-86171600
Accession: 1270156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0031442	MMR_HSR1	PF01926.23	3.9e-07	1	1
MGP_BALBcJ_P0031447	MMR_HSR1	PF01926.23	6.9e-07	1	1
MGP_BALBcJ_P0031444	MMR_HSR1	PF01926.23	8e-07	1	1
MGP_BALBcJ_P0031441	MMR_HSR1	PF01926.23	1.2e-06	1	1
MGP_BALBcJ_P0031443	MMR_HSR1	PF01926.23	1.3e-06	1	1
MGP_BALBcJ_P0031435	MMR_HSR1	PF01926.23	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0031448	-	560	-	-	- (aa)	-	-
MGP_BALBcJ_T0031450	-	535	-	-	- (aa)	-	-
MGP_BALBcJ_T0031435	-	666	XM_006532496	MGP_BALBcJ_P0031435	213 (aa)	XP_006532559	P28661
MGP_BALBcJ_T0031447	-	878	-	MGP_BALBcJ_P0031447	280 (aa)	-	-
MGP_BALBcJ_T0031446	-	2136	-	-	- (aa)	-	-
MGP_BALBcJ_T0031445	-	1252	-	-	- (aa)	-	-
MGP_BALBcJ_T0031444	-	1245	-	MGP_BALBcJ_P0031444	379 (aa)	-	-
MGP_BALBcJ_T0031436	-	900	-	-	- (aa)	-	-
MGP_BALBcJ_T0031437	-	1884	-	-	- (aa)	-	-
MGP_BALBcJ_T0031441	-	1550	-	MGP_BALBcJ_P0031441	459 (aa)	-	-
MGP_BALBcJ_T0031440	-	1354	-	-	- (aa)	-	-
MGP_BALBcJ_T0031443	-	1726	-	MGP_BALBcJ_P0031443	478 (aa)	-	-
MGP_BALBcJ_T0031438	-	1474	-	-	- (aa)	-	-
MGP_BALBcJ_T0031439	-	1449	-	-	- (aa)	-	-
MGP_BALBcJ_T0031449	-	845	-	-	- (aa)	-	-
MGP_BALBcJ_T0031442	-	759	-	MGP_BALBcJ_P0031442	232 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0018846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018846	Sept4	94	66.514	MGP_BALBcJ_G0033014	Sept1	100	66.897
MGP_BALBcJ_G0018846	Sept4	89	43.062	MGP_BALBcJ_G0035598	Sept6	67	43.390
MGP_BALBcJ_G0018846	Sept4	91	41.509	MGP_BALBcJ_G0017191	Sept10	67	43.878
MGP_BALBcJ_G0018846	Sept4	92	43.256	MGP_BALBcJ_G0022446	Sept12	84	42.446
MGP_BALBcJ_G0018846	Sept4	92	50.467	MGP_BALBcJ_G0019389	Sept9	81	52.551
MGP_BALBcJ_G0018846	Sept4	93	68.837	MGP_BALBcJ_G0016280	Sept2	100	65.421
MGP_BALBcJ_G0018846	Sept4	93	60.185	MGP_BALBcJ_G0034466	Sept7	70	59.091
MGP_BALBcJ_G0018846	Sept4	94	83.028	MGP_BALBcJ_G0022582	Sept5	97	76.359
MGP_BALBcJ_G0018846	Sept4	93	49.537	MGP_BALBcJ_G0022106	Sept3	92	49.682
MGP_BALBcJ_G0018846	Sept4	85	45.000	MGP_BALBcJ_G0029734	Sept11	67	43.878
MGP_BALBcJ_G0018846	Sept4	87	43.842	MGP_BALBcJ_G0018238	Sept8	66	43.878