EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0018865 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 383669 bases
Position: chr11:86973461-87357129
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0031524	RRM_1	PF00076.22	6.3e-34	1	2
MGP_BALBcJ_P0031524	RRM_1	PF00076.22	6.3e-34	2	2
MGP_BALBcJ_P0031525	RRM_1	PF00076.22	6.5e-34	1	2
MGP_BALBcJ_P0031525	RRM_1	PF00076.22	6.5e-34	2	2
MGP_BALBcJ_P0031528	RRM_1	PF00076.22	3.9e-22	1	1
MGP_BALBcJ_P0031529	RRM_1	PF00076.22	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0031528	-	405	-	MGP_BALBcJ_P0031528	113 (aa)	-	-
MGP_BALBcJ_T0031529	-	679	-	MGP_BALBcJ_P0031529	162 (aa)	-	-
MGP_BALBcJ_T0031530	-	626	-	-	- (aa)	-	-
MGP_BALBcJ_T0031524	-	6356	XM_006534432	MGP_BALBcJ_P0031524	328 (aa)	XP_006534495	Q920Q6
MGP_BALBcJ_T0031525	-	1857	-	MGP_BALBcJ_P0031525	346 (aa)	-	-
MGP_BALBcJ_T0031526	-	1749	-	-	- (aa)	-	-
MGP_BALBcJ_T0031527	-	2527	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0018865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0018865's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0018865	Msi2	61	42.857	MGP_BALBcJ_G0035515	Rbm3	82	43.243
MGP_BALBcJ_G0018865	Msi2	61	41.429	MGP_BALBcJ_G0017426	Cirbp	88	43.243
MGP_BALBcJ_G0018865	Msi2	60	33.824	MGP_BALBcJ_G0019925	Slirp	70	33.824
MGP_BALBcJ_G0018865	Msi2	73	37.349	MGP_BALBcJ_G0026928	Rbm38	70	38.095
MGP_BALBcJ_G0018865	Msi2	61	42.857	MGP_BALBcJ_G0035718	Rbmx	88	45.205
MGP_BALBcJ_G0018865	Msi2	84	30.208	MGP_BALBcJ_G0028558	Elavl4	78	30.088
MGP_BALBcJ_G0018865	Msi2	99	42.400	MGP_BALBcJ_G0017432	Dazap1	92	49.462
MGP_BALBcJ_G0018865	Msi2	100	54.867	MGP_BALBcJ_G0029758	Hnrnpdl	78	41.634
MGP_BALBcJ_G0018865	Msi2	100	53.982	MGP_BALBcJ_G0029756	Hnrnpd	89	58.025
MGP_BALBcJ_G0018865	Msi2	100	35.398	MGP_BALBcJ_G0029110	Tardbp	79	31.818
MGP_BALBcJ_G0018865	Msi2	70	31.250	MGP_BALBcJ_G0028426	Elavl2	72	32.632
MGP_BALBcJ_G0018865	Msi2	50	33.333	MGP_BALBcJ_G0015973	Boll	65	32.857
MGP_BALBcJ_G0018865	Msi2	65	38.356	MGP_BALBcJ_G0033782	-	54	40.789
MGP_BALBcJ_G0018865	Msi2	99	41.228	MGP_BALBcJ_G0020577	Hnrnpa0	60	41.989
MGP_BALBcJ_G0018865	Msi2	100	90.323	MGP_BALBcJ_G0029944	Msi1	99	75.665
MGP_BALBcJ_G0018865	Msi2	100	44.348	MGP_BALBcJ_G0030715	Hnrnpa2b1	56	48.193
MGP_BALBcJ_G0018865	Msi2	100	52.212	MGP_BALBcJ_G0018209	Hnrnpab	73	52.000