EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0019255 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 10775 bases
Position: chr11:105827279-105838053
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0033048	P68HR	PF08061.11	1.6e-06	1	1
MGP_BALBcJ_P0033048	DEAD	PF00270.29	1.8e-47	1	1
MGP_BALBcJ_P0033053	DEAD	PF00270.29	1.5e-15	1	1
MGP_BALBcJ_P0033054	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0033052	-	810	-	-	- (aa)	-	-
MGP_BALBcJ_T0033053	-	861	-	MGP_BALBcJ_P0033053	182 (aa)	-	-
MGP_BALBcJ_T0033050	-	496	-	-	- (aa)	-	-
MGP_BALBcJ_T0033051	-	708	-	-	- (aa)	-	-
MGP_BALBcJ_T0033049	-	3065	-	MGP_BALBcJ_P0033049	406 (aa)	-	-
MGP_BALBcJ_T0033048	-	3307	XM_006532135	MGP_BALBcJ_P0033048	531 (aa)	XP_006532198	B1ARB9
MGP_BALBcJ_T0033054	-	831	-	MGP_BALBcJ_P0033054	167 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0019255's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0019255's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0019255	Ddx5	72	33.110	MGP_BALBcJ_G0019421	Eif4a3	82	34.857
MGP_BALBcJ_G0019255	Ddx5	76	34.062	MGP_BALBcJ_G0033678	Ddx49	97	35.311
MGP_BALBcJ_G0019255	Ddx5	73	31.148	MGP_BALBcJ_G0034505	Ddx25	73	32.425
MGP_BALBcJ_G0019255	Ddx5	65	30.137	MGP_BALBcJ_G0030076	Ddx55	57	30.137
MGP_BALBcJ_G0019255	Ddx5	80	42.522	MGP_BALBcJ_G0035542	Ddx3x	61	43.276
MGP_BALBcJ_G0019255	Ddx5	78	30.887	MGP_BALBcJ_G0022645	Eif4a2	92	32.571
MGP_BALBcJ_G0019255	Ddx5	89	45.040	MGP_BALBcJ_G0035037	Ddx43	68	44.519
MGP_BALBcJ_G0019255	Ddx5	80	38.922	MGP_BALBcJ_G0020888	Ddx4	57	39.012
MGP_BALBcJ_G0019255	Ddx5	74	30.719	MGP_BALBcJ_G0016355	Ddx18	50	32.239
MGP_BALBcJ_G0019255	Ddx5	70	33.446	MGP_BALBcJ_G0017241	Ddx50	51	34.302
MGP_BALBcJ_G0019255	Ddx5	74	31.204	MGP_BALBcJ_G0018803	Ddx52	66	31.204
MGP_BALBcJ_G0019255	Ddx5	80	42.522	MGP_BALBcJ_G0016858	D1Pas1	61	43.032
MGP_BALBcJ_G0019255	Ddx5	78	31.498	MGP_BALBcJ_G0018486	Eif4a1	89	32.804
MGP_BALBcJ_G0019255	Ddx5	86	32.857	MGP_BALBcJ_G0016484	Ddx59	66	33.094
MGP_BALBcJ_G0019255	Ddx5	71	37.457	MGP_BALBcJ_G0031394	Ddx47	80	37.389
MGP_BALBcJ_G0019255	Ddx5	93	83.598	MGP_BALBcJ_G0022044	Ddx17	72	82.180
MGP_BALBcJ_G0019255	Ddx5	81	36.389	MGP_BALBcJ_G0022270	Ddx23	50	37.915
MGP_BALBcJ_G0019255	Ddx5	81	38.235	MGP_BALBcJ_G0020552	Ddx41	64	39.163
MGP_BALBcJ_G0019255	Ddx5	71	30.861	MGP_BALBcJ_G0025506	Ddx31	56	31.313