EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0019389 (Gene tree)
Gene ID: -
Gene Symbol: Sept9
Alias: Kiaa0991|MSF1|Msf|PNUTL4|SL3-3 integration site 1|Sint1
Full Name: septin 9
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 169607 bases
Position: chr11:116421755-116591361
Accession: 1858222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0033722	MMR_HSR1	PF01926.23	1.3e-09	1	1
MGP_BALBcJ_P0033719	MMR_HSR1	PF01926.23	5.9e-09	1	1
MGP_BALBcJ_P0033720	MMR_HSR1	PF01926.23	6.1e-09	1	1
MGP_BALBcJ_P0033718	MMR_HSR1	PF01926.23	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0033724	-	647	-	-	- (aa)	-	-
MGP_BALBcJ_T0033725	-	555	-	-	- (aa)	-	-
MGP_BALBcJ_T0033719	-	3869	-	MGP_BALBcJ_P0033719	565 (aa)	-	-
MGP_BALBcJ_T0033718	-	3616	XM_006533744	MGP_BALBcJ_P0033718	583 (aa)	XP_006533807	Q80UG5
MGP_BALBcJ_T0033720	-	3496	-	MGP_BALBcJ_P0033720	576 (aa)	-	-
MGP_BALBcJ_T0033721	-	374	-	MGP_BALBcJ_P0033721	74 (aa)	-	-
MGP_BALBcJ_T0033722	-	778	-	MGP_BALBcJ_P0033722	242 (aa)	-	-
MGP_BALBcJ_T0033723	-	4863	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0019389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0019389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0019389	Sept9	81	51.269	MGP_BALBcJ_G0034466	Sept7	68	49.502
MGP_BALBcJ_G0019389	Sept9	90	47.297	MGP_BALBcJ_G0022582	Sept5	85	45.860
MGP_BALBcJ_G0019389	Sept9	81	52.551	MGP_BALBcJ_G0018846	Sept4	92	50.467
MGP_BALBcJ_G0019389	Sept9	82	75.377	MGP_BALBcJ_G0022106	Sept3	87	73.720
MGP_BALBcJ_G0019389	Sept9	81	45.455	MGP_BALBcJ_G0018238	Sept8	68	42.000
MGP_BALBcJ_G0019389	Sept9	81	44.949	MGP_BALBcJ_G0017191	Sept10	67	43.836
MGP_BALBcJ_G0019389	Sept9	81	46.970	MGP_BALBcJ_G0035598	Sept6	99	36.552
MGP_BALBcJ_G0019389	Sept9	81	46.970	MGP_BALBcJ_G0029734	Sept11	67	42.953
MGP_BALBcJ_G0019389	Sept9	88	49.767	MGP_BALBcJ_G0016280	Sept2	100	49.778
MGP_BALBcJ_G0019389	Sept9	82	64.322	MGP_BALBcJ_G0022446	Sept12	78	65.462
MGP_BALBcJ_G0019389	Sept9	83	46.000	MGP_BALBcJ_G0033014	Sept1	100	50.000