EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0019505 (Gene tree)
Gene ID: -
Gene Symbol: Dnajc27
Alias: AI639580|C330021A05Rik|Rabj|Rbj
Full Name: DnaJ heat shock protein family (Hsp40) member C27
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 28235 bases
Position: chr12:989160-1017394
Accession: 2443036
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0034291	MMR_HSR1	PF01926.23	3.8e-05	1	1
MGP_BALBcJ_P0034292	MMR_HSR1	PF01926.23	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0034291	-	4713	XM_006515052	MGP_BALBcJ_P0034291	273 (aa)	XP_006515115	Q8CFP6
MGP_BALBcJ_T0034292	-	2934	-	MGP_BALBcJ_P0034292	273 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0019505's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0019505's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0019505	Dnajc27	66	30.220	MGP_BALBcJ_G0019314	Rab37	80	30.220
MGP_BALBcJ_G0019505	Dnajc27	63	33.714	MGP_BALBcJ_G0023938	Rab31	87	33.714
MGP_BALBcJ_G0019505	Dnajc27	61	34.731	MGP_BALBcJ_G0024094	Rab18	79	34.731
MGP_BALBcJ_G0019505	Dnajc27	70	30.693	MGP_BALBcJ_G0025624	Rab14	92	31.250
MGP_BALBcJ_G0019505	Dnajc27	58	31.447	MGP_BALBcJ_G0026935	Rab22a	79	31.447
MGP_BALBcJ_G0019505	Dnajc27	60	36.145	MGP_BALBcJ_G0030984	Rab7	95	37.333
MGP_BALBcJ_G0019505	Dnajc27	58	32.278	MGP_BALBcJ_G0021255	Rab2b	78	32.692
MGP_BALBcJ_G0019505	Dnajc27	60	30.303	MGP_BALBcJ_G0034916	Rab11a	74	30.303
MGP_BALBcJ_G0019505	Dnajc27	64	30.286	MGP_BALBcJ_G0035831	Rab39b	80	30.286
MGP_BALBcJ_G0019505	Dnajc27	60	32.927	MGP_BALBcJ_G0028009	Rab2a	75	32.927
MGP_BALBcJ_G0019505	Dnajc27	56	33.117	MGP_BALBcJ_G0035663	Rab33a	63	33.117
MGP_BALBcJ_G0019505	Dnajc27	60	31.325	MGP_BALBcJ_G0036076	Rab9b	82	31.325