EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0019832 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 5741 bases
Position: chr12:78639668-78645408
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0035159	RRM_1	PF00076.22	1.7e-30	1	2
MGP_BALBcJ_P0035159	RRM_1	PF00076.22	1.7e-30	2	2
MGP_BALBcJ_P0035164	RRM_1	PF00076.22	1.7e-30	1	2
MGP_BALBcJ_P0035164	RRM_1	PF00076.22	1.7e-30	2	2
MGP_BALBcJ_P0035169	RRM_1	PF00076.22	1.7e-30	1	2
MGP_BALBcJ_P0035169	RRM_1	PF00076.22	1.7e-30	2	2
MGP_BALBcJ_P0035161	RRM_1	PF00076.22	1.7e-30	1	2
MGP_BALBcJ_P0035161	RRM_1	PF00076.22	1.7e-30	2	2
MGP_BALBcJ_P0035163	RRM_1	PF00076.22	1.7e-30	1	2
MGP_BALBcJ_P0035163	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0035168	-	490	-	-	- (aa)	-	-
MGP_BALBcJ_T0035169	-	1568	-	MGP_BALBcJ_P0035169	269 (aa)	-	-
MGP_BALBcJ_T0035164	-	1491	-	MGP_BALBcJ_P0035164	269 (aa)	-	-
MGP_BALBcJ_T0035165	-	538	-	-	- (aa)	-	-
MGP_BALBcJ_T0035166	-	886	-	-	- (aa)	-	-
MGP_BALBcJ_T0035167	-	547	-	MGP_BALBcJ_P0035167	46 (aa)	-	-
MGP_BALBcJ_T0035160	-	2940	-	-	- (aa)	-	-
MGP_BALBcJ_T0035161	-	1510	-	MGP_BALBcJ_P0035161	270 (aa)	-	-
MGP_BALBcJ_T0035162	-	2720	-	-	- (aa)	-	-
MGP_BALBcJ_T0035163	-	1498	-	MGP_BALBcJ_P0035163	270 (aa)	-	-
MGP_BALBcJ_T0035159	-	1527	XM_006515629	MGP_BALBcJ_P0035159	269 (aa)	XP_006515692	O35326
MGP_BALBcJ_T0035170	-	3483	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0019832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0019832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0019832	Srsf5	96	51.020	MGP_BALBcJ_G0018860	Srsf1	80	46.988
MGP_BALBcJ_G0019832	Srsf5	89	48.780	MGP_BALBcJ_G0029941	Srsf9	68	39.394
MGP_BALBcJ_G0019832	Srsf5	89	63.415	MGP_BALBcJ_G0026788	Srsf6	50	71.642