EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0020223 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 6575 bases
Position: chr13:18390318-18396892
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	1	7
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	2	7
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	3	7
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	4	7
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	5	7
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	6	7
MGP_BALBcJ_P0036363	zf-C2H2	PF00096.26	8.8e-41	7	7
MGP_BALBcJ_P0036363	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0036363	-	2398	-	MGP_BALBcJ_P0036363	477 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_BALBcJ_G0020223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0020223's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0020223	Zkscan4	53	50.209	MGP_BALBcJ_G0032098	-	53	50.209
MGP_BALBcJ_G0020223	Zkscan4	53	52.381	MGP_BALBcJ_G0031839	Zfp574	66	49.057
MGP_BALBcJ_G0020223	Zkscan4	54	61.184	MGP_BALBcJ_G0031974	Zfp420	99	50.909
MGP_BALBcJ_G0020223	Zkscan4	50	41.518	MGP_BALBcJ_G0029032	Zbtb17	56	41.518
MGP_BALBcJ_G0020223	Zkscan4	53	45.852	MGP_BALBcJ_G0018290	Zfp672	100	41.975
MGP_BALBcJ_G0020223	Zkscan4	51	45.342	MGP_BALBcJ_G0029484	Zbtb49	66	47.222
MGP_BALBcJ_G0020223	Zkscan4	53	37.561	MGP_BALBcJ_G0026906	Zfp64	70	37.561
MGP_BALBcJ_G0020223	Zkscan4	60	46.099	MGP_BALBcJ_G0018526	Bcl6b	51	46.099
MGP_BALBcJ_G0020223	Zkscan4	95	49.664	MGP_BALBcJ_G0023223	Zscan10	98	43.564
MGP_BALBcJ_G0020223	Zkscan4	54	49.091	MGP_BALBcJ_G0020652	Zfp759	88	45.622
MGP_BALBcJ_G0020223	Zkscan4	56	46.457	MGP_BALBcJ_G0020651	Rslcan18	74	45.455
MGP_BALBcJ_G0020223	Zkscan4	57	50.000	MGP_BALBcJ_G0033743	Zfp709	86	50.000
MGP_BALBcJ_G0020223	Zkscan4	54	47.032	MGP_BALBcJ_G0033744	Zfp882	85	47.032
MGP_BALBcJ_G0020223	Zkscan4	53	52.273	MGP_BALBcJ_G0031806	-	98	52.273
MGP_BALBcJ_G0020223	Zkscan4	50	44.492	MGP_BALBcJ_G0031910	Zfp974	89	44.492
MGP_BALBcJ_G0020223	Zkscan4	53	54.491	MGP_BALBcJ_G0034117	Zfp1	75	54.491
MGP_BALBcJ_G0020223	Zkscan4	52	47.674	MGP_BALBcJ_G0024567	Zfp236	61	47.674
MGP_BALBcJ_G0020223	Zkscan4	70	45.455	MGP_BALBcJ_G0023192	Zfp677	89	45.455
MGP_BALBcJ_G0020223	Zkscan4	67	47.280	MGP_BALBcJ_G0023194	Zfp51	99	47.577
MGP_BALBcJ_G0020223	Zkscan4	50	52.414	MGP_BALBcJ_G0026868	Zfp334	68	52.414
MGP_BALBcJ_G0020223	Zkscan4	50	45.417	MGP_BALBcJ_G0018339	Zfp867	77	45.417
MGP_BALBcJ_G0020223	Zkscan4	54	45.133	MGP_BALBcJ_G0032107	Zfp715	71	45.133
MGP_BALBcJ_G0020223	Zkscan4	51	51.695	MGP_BALBcJ_G0021980	Zfp251	73	48.498
MGP_BALBcJ_G0020223	Zkscan4	53	37.229	MGP_BALBcJ_G0033958	Zfp319	87	37.229
MGP_BALBcJ_G0020223	Zkscan4	54	47.857	MGP_BALBcJ_G0030681	Repin1	95	47.857
MGP_BALBcJ_G0020223	Zkscan4	50	48.372	MGP_BALBcJ_G0031158	Zfp637	71	48.372
MGP_BALBcJ_G0020223	Zkscan4	52	53.535	MGP_BALBcJ_G0018193	Zfp454	70	53.535
MGP_BALBcJ_G0020223	Zkscan4	53	47.826	MGP_BALBcJ_G0030812	Prdm5	78	47.826
MGP_BALBcJ_G0020223	Zkscan4	53	52.000	MGP_BALBcJ_G0031805	Zfp108	71	52.000
MGP_BALBcJ_G0020223	Zkscan4	53	49.286	MGP_BALBcJ_G0031807	Zfp61	58	49.286
MGP_BALBcJ_G0020223	Zkscan4	65	51.938	MGP_BALBcJ_G0031801	Zfp235	74	51.938
MGP_BALBcJ_G0020223	Zkscan4	65	47.845	MGP_BALBcJ_G0031800	Zfp112	56	47.845
MGP_BALBcJ_G0020223	Zkscan4	61	46.023	MGP_BALBcJ_G0031808	Zfp94	75	47.137
MGP_BALBcJ_G0020223	Zkscan4	64	55.435	MGP_BALBcJ_G0026439	Zfp661	76	55.435
MGP_BALBcJ_G0020223	Zkscan4	58	46.296	MGP_BALBcJ_G0031558	Zfp865	78	36.199
MGP_BALBcJ_G0020223	Zkscan4	52	47.973	MGP_BALBcJ_G0031550	Zfp628	63	45.238
MGP_BALBcJ_G0020223	Zkscan4	54	48.408	MGP_BALBcJ_G0023214	Zfp945	92	46.330
MGP_BALBcJ_G0020223	Zkscan4	50	49.057	MGP_BALBcJ_G0033020	Zfp768	52	52.632