EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0020583 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 20159 bases
Position: chr13:56128836-56148994
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0037242	KH_1	PF00013.29	2.2e-43	1	3
MGP_BALBcJ_P0037242	KH_1	PF00013.29	2.2e-43	2	3
MGP_BALBcJ_P0037242	KH_1	PF00013.29	2.2e-43	3	3
MGP_BALBcJ_P0037239	KH_1	PF00013.29	2.4e-43	1	3
MGP_BALBcJ_P0037239	KH_1	PF00013.29	2.4e-43	2	3
MGP_BALBcJ_P0037239	KH_1	PF00013.29	2.4e-43	3	3
MGP_BALBcJ_P0037240	KH_1	PF00013.29	2.8e-43	1	3
MGP_BALBcJ_P0037240	KH_1	PF00013.29	2.8e-43	2	3
MGP_BALBcJ_P0037240	KH_1	PF00013.29	2.8e-43	3	3
MGP_BALBcJ_P0037238	KH_1	PF00013.29	3e-43	1	3
MGP_BALBcJ_P0037238	KH_1	PF00013.29	3e-43	2	3
MGP_BALBcJ_P0037238	KH_1	PF00013.29	3e-43	3	3
MGP_BALBcJ_P0037241	KH_1	PF00013.29	2.2e-33	1	2
MGP_BALBcJ_P0037241	KH_1	PF00013.29	2.2e-33	2	2
MGP_BALBcJ_P0037247	KH_1	PF00013.29	1.1e-23	1	2
MGP_BALBcJ_P0037247	KH_1	PF00013.29	1.1e-23	2	2
MGP_BALBcJ_P0037244	KH_1	PF00013.29	1.6e-23	1	2
MGP_BALBcJ_P0037244	KH_1	PF00013.29	1.6e-23	2	2
MGP_BALBcJ_P0037250	KH_1	PF00013.29	2.9e-23	1	2
MGP_BALBcJ_P0037250	KH_1	PF00013.29	2.9e-23	2	2
MGP_BALBcJ_P0037252	KH_1	PF00013.29	3.3e-09	1	1
MGP_BALBcJ_P0037254	KH_1	PF00013.29	6.6e-09	1	1
MGP_BALBcJ_P0037249	KH_1	PF00013.29	3.4e-05	1	1
MGP_BALBcJ_P0037254	KH_2	PF07650.17	0.00011	1	1
MGP_BALBcJ_P0037249	KH_2	PF07650.17	0.00023	1	1
MGP_BALBcJ_P0037249	ROKNT	PF08067.11	2e-27	1	1
MGP_BALBcJ_P0037244	ROKNT	PF08067.11	3e-27	1	1
MGP_BALBcJ_P0037254	ROKNT	PF08067.11	3.6e-27	1	1
MGP_BALBcJ_P0037242	ROKNT	PF08067.11	7.5e-27	1	1
MGP_BALBcJ_P0037239	ROKNT	PF08067.11	7.8e-27	1	1
MGP_BALBcJ_P0037247	ROKNT	PF08067.11	1.9e-26	1	1
MGP_BALBcJ_P0037240	ROKNT	PF08067.11	4e-26	1	1
MGP_BALBcJ_P0037238	ROKNT	PF08067.11	4e-26	1	1
MGP_BALBcJ_P0037250	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0037253	-	775	-	-	- (aa)	-	-
MGP_BALBcJ_T0037238	-	2865	XM_006517103	MGP_BALBcJ_P0037238	464 (aa)	XP_006517166	P61979
MGP_BALBcJ_T0037239	-	2521	-	MGP_BALBcJ_P0037239	440 (aa)	-	-
MGP_BALBcJ_T0037254	-	1053	-	MGP_BALBcJ_P0037254	97 (aa)	-	-
MGP_BALBcJ_T0037255	-	780	-	-	- (aa)	-	-
MGP_BALBcJ_T0037250	-	676	-	MGP_BALBcJ_P0037250	178 (aa)	-	-
MGP_BALBcJ_T0037249	-	723	-	MGP_BALBcJ_P0037249	77 (aa)	-	-
MGP_BALBcJ_T0037248	-	459	-	-	- (aa)	-	-
MGP_BALBcJ_T0037252	-	476	-	MGP_BALBcJ_P0037252	87 (aa)	-	-
MGP_BALBcJ_T0037251	-	833	-	-	- (aa)	-	-
MGP_BALBcJ_T0037243	-	1077	-	MGP_BALBcJ_P0037243	358 (aa)	-	-
MGP_BALBcJ_T0037242	-	2439	-	MGP_BALBcJ_P0037242	434 (aa)	-	-
MGP_BALBcJ_T0037241	-	2371	-	MGP_BALBcJ_P0037241	389 (aa)	-	-
MGP_BALBcJ_T0037240	-	2462	-	MGP_BALBcJ_P0037240	458 (aa)	-	-
MGP_BALBcJ_T0037247	-	900	-	MGP_BALBcJ_P0037247	256 (aa)	-	-
MGP_BALBcJ_T0037246	-	737	-	-	- (aa)	-	-
MGP_BALBcJ_T0037245	-	522	-	-	- (aa)	-	-
MGP_BALBcJ_T0037244	-	1004	-	MGP_BALBcJ_P0037244	299 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0020583	Hnrnpk	77	50.633	MGP_BALBcJ_G0017327	Pcbp3	79	41.667
MGP_BALBcJ_G0020583	Hnrnpk	93	98.745	MGP_BALBcJ_G0032442	-	98	98.745
MGP_BALBcJ_G0020583	Hnrnpk	57	38.235	MGP_BALBcJ_G0031730	Nova2	54	37.681
MGP_BALBcJ_G0020583	Hnrnpk	78	31.724	MGP_BALBcJ_G0022381	Pcbp2	85	44.118
MGP_BALBcJ_G0020583	Hnrnpk	57	34.615	MGP_BALBcJ_G0027959	Fubp1	53	36.923
MGP_BALBcJ_G0020583	Hnrnpk	57	38.235	MGP_BALBcJ_G0031729	-	50	38.235
MGP_BALBcJ_G0020583	Hnrnpk	78	31.724	MGP_BALBcJ_G0030957	Pcbp1	86	42.574
MGP_BALBcJ_G0020583	Hnrnpk	78	32.414	MGP_BALBcJ_G0035205	Pcbp4	86	33.728
MGP_BALBcJ_G0020583	Hnrnpk	58	38.806	MGP_BALBcJ_G0019656	Nova1	57	38.806