EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0020888 (Gene tree)
Gene ID: -
Gene Symbol: Ddx4
Alias: AV206478|Mvh|VASA|Vasa|mvh / m'vasa
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 54097 bases
Position: chr13:111268798-111322894
Accession: 102670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0038144	DEAD	PF00270.29	4.5e-49	1	1
MGP_BALBcJ_P0038145	DEAD	PF00270.29	5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0038145	-	2848	-	MGP_BALBcJ_P0038145	728 (aa)	-	-
MGP_BALBcJ_T0038144	-	2770	XM_006517524	MGP_BALBcJ_P0038144	702 (aa)	XP_006517587	Q61496

Gene Model

Click here to download MGP_BALBcJ_G0020888's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0020888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0020888	Ddx4	56	40.000	MGP_BALBcJ_G0035037	Ddx43	60	40.000
MGP_BALBcJ_G0020888	Ddx4	62	52.596	MGP_BALBcJ_G0016858	D1Pas1	71	49.578
MGP_BALBcJ_G0020888	Ddx4	52	33.687	MGP_BALBcJ_G0033678	Ddx49	95	33.616
MGP_BALBcJ_G0020888	Ddx4	54	30.326	MGP_BALBcJ_G0034505	Ddx25	80	30.488
MGP_BALBcJ_G0020888	Ddx4	53	38.684	MGP_BALBcJ_G0016484	Ddx59	59	38.684
MGP_BALBcJ_G0020888	Ddx4	57	38.519	MGP_BALBcJ_G0020552	Ddx41	64	38.519
MGP_BALBcJ_G0020888	Ddx4	56	34.271	MGP_BALBcJ_G0031394	Ddx47	93	33.760
MGP_BALBcJ_G0020888	Ddx4	57	39.012	MGP_BALBcJ_G0019255	Ddx5	80	38.922
MGP_BALBcJ_G0020888	Ddx4	67	50.513	MGP_BALBcJ_G0035542	Ddx3x	69	51.528
MGP_BALBcJ_G0020888	Ddx4	56	30.691	MGP_BALBcJ_G0019421	Eif4a3	90	30.691
MGP_BALBcJ_G0020888	Ddx4	57	39.163	MGP_BALBcJ_G0022044	Ddx17	61	39.163
MGP_BALBcJ_G0020888	Ddx4	57	34.069	MGP_BALBcJ_G0018803	Ddx52	66	34.069