EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_BALBcJ_G0021292 (Gene tree)
Gene ID
-
Gene Symbol
Pabpn1
Alias
PAB2|Pab2|Pabp2|Pabp3|mPABII|poly(A) binding protein II
Full Name
poly(A) binding protein%2C nuclear 1
Gene Type
protein_coding
Species
Mus_musculus_balbcj
Status
putative
Strand
Plus strand
Length
6487 bases
Position
chr14:47888116-47894602
Accession
1859158
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_BALBcJ_P0039434RRM_1PF00076.223.8e-1511
MGP_BALBcJ_P0039439RRM_1PF00076.224.8e-1511
MGP_BALBcJ_P0039437RRM_1PF00076.221.3e-1411
MGP_BALBcJ_P0039435RRM_1PF00076.221.4e-1411
MGP_BALBcJ_P0039436RRM_1PF00076.221.5e-1411
MGP_BALBcJ_P0039440RRM_1PF00076.228.6e-0511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_BALBcJ_T0039438-826-MGP_BALBcJ_P003943873 (aa)--
MGP_BALBcJ_T0039439-700-MGP_BALBcJ_P0039439178 (aa)--
MGP_BALBcJ_T0039436-1777-MGP_BALBcJ_P0039436319 (aa)--
MGP_BALBcJ_T0039437-2581-MGP_BALBcJ_P0039437292 (aa)--
MGP_BALBcJ_T0039434-680XM_006519272MGP_BALBcJ_P0039434164 (aa)XP_006519335Q8CCS6
MGP_BALBcJ_T0039435-1083-MGP_BALBcJ_P0039435302 (aa)--
MGP_BALBcJ_T0039440-939-MGP_BALBcJ_P003944042 (aa)--
Gene Model
Click here to download MGP_BALBcJ_G0021292's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0021292's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_BALBcJ_G0021292Pabpn19361.538MGP_BALBcJ_G0034209Pabpn1l5155.102
MGP_BALBcJ_G0021292Pabpn1100100.000MGP_BALBcJ_G0021291Gm2052157100.000

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