EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0022430 (Gene tree)
Gene ID: -
Gene Symbol: Srl
Alias: 9830004M20Rik|AW108387|Sar|sar|sarcalumenin
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 73156 bases
Position: chr16:947331-1020486
Accession: 2146620
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0042912	MMR_HSR1	PF01926.23	2.1e-08	1	1
MGP_BALBcJ_P0042913	MMR_HSR1	PF01926.23	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0042915	-	349	-	-	- (aa)	-	-
MGP_BALBcJ_T0042914	-	366	-	-	- (aa)	-	-
MGP_BALBcJ_T0042913	-	5000	-	MGP_BALBcJ_P0042913	910 (aa)	-	-
MGP_BALBcJ_T0042912	-	3698	XM_006521687	MGP_BALBcJ_P0042912	472 (aa)	XP_006521750	Q7TQ48

Gene Model

Click here to download MGP_BALBcJ_G0022430's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0022430's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0022430	Srl	82	33.162	MGP_BALBcJ_G0031674	Ehd2	97	47.059
MGP_BALBcJ_G0022430	Srl	79	32.440	MGP_BALBcJ_G0023980	Ehd3	73	32.506
MGP_BALBcJ_G0022430	Srl	84	31.738	MGP_BALBcJ_G0026334	Ehd4	71	31.738
MGP_BALBcJ_G0022430	Srl	77	33.973	MGP_BALBcJ_G0024723	Ehd1	67	33.973