EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0022902 (Gene tree)
Gene ID: -
Gene Symbol: Arl6
Alias: 1110018H24Rik|2210411E14Rik|ARL6|BBS3|Bbs3
Full Name: ADP-ribosylation factor-like 6
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 26829 bases
Position: chr16:56546574-56573402
Accession: 1927136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0044772	MMR_HSR1	PF01926.23	2.9e-06	1	1
MGP_BALBcJ_P0044773	MMR_HSR1	PF01926.23	3.2e-06	1	1
MGP_BALBcJ_P0044774	MMR_HSR1	PF01926.23	3.2e-06	1	1
MGP_BALBcJ_P0044775	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0044773	-	1553	-	MGP_BALBcJ_P0044773	193 (aa)	-	-
MGP_BALBcJ_T0044772	-	1695	XM_006522398	MGP_BALBcJ_P0044772	186 (aa)	XP_006522461	O88848
MGP_BALBcJ_T0044775	-	810	-	MGP_BALBcJ_P0044775	194 (aa)	-	-
MGP_BALBcJ_T0044774	-	874	-	MGP_BALBcJ_P0044774	193 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0022902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0022902's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0022902	Arl6	91	36.471	MGP_BALBcJ_G0017573	Arl1	94	35.593
MGP_BALBcJ_G0022902	Arl6	97	37.433	MGP_BALBcJ_G0019643	Arl4a	92	37.433
MGP_BALBcJ_G0022902	Arl6	92	35.870	MGP_BALBcJ_G0016225	Arl4c	94	35.870
MGP_BALBcJ_G0022902	Arl6	99	30.851	MGP_BALBcJ_G0027267	Arl14	94	30.851
MGP_BALBcJ_G0022902	Arl6	92	40.936	MGP_BALBcJ_G0019213	Arf2	92	40.936
MGP_BALBcJ_G0022902	Arl6	91	37.647	MGP_BALBcJ_G0025705	Arl5a	93	37.647
MGP_BALBcJ_G0022902	Arl6	88	34.146	MGP_BALBcJ_G0021403	Arl11	91	34.146
MGP_BALBcJ_G0022902	Arl6	90	36.527	MGP_BALBcJ_G0030491	Arf5	91	36.527
MGP_BALBcJ_G0022902	Arl6	85	32.075	MGP_BALBcJ_G0016460	Arl8a	82	32.075
MGP_BALBcJ_G0022902	Arl6	92	30.387	MGP_BALBcJ_G0026995	Arfrp1	93	33.929
MGP_BALBcJ_G0022902	Arl6	96	41.341	MGP_BALBcJ_G0022274	Arf3	96	41.341
MGP_BALBcJ_G0022902	Arl6	98	35.519	MGP_BALBcJ_G0024717	Arl2	97	35.519
MGP_BALBcJ_G0022902	Arl6	98	38.043	MGP_BALBcJ_G0018987	Arl5c	99	38.043
MGP_BALBcJ_G0022902	Arl6	54	37.143	MGP_BALBcJ_G0018216	Sar1b	52	37.143
MGP_BALBcJ_G0022902	Arl6	89	31.792	MGP_BALBcJ_G0019152	Arl4d	84	31.792
MGP_BALBcJ_G0022902	Arl6	61	31.579	MGP_BALBcJ_G0020521	Arl10	53	31.579
MGP_BALBcJ_G0022902	Arl6	85	32.704	MGP_BALBcJ_G0031082	Arl8b	82	32.704
MGP_BALBcJ_G0022902	Arl6	99	36.216	MGP_BALBcJ_G0025182	Arl3	99	36.216
MGP_BALBcJ_G0022902	Arl6	89	39.157	MGP_BALBcJ_G0025339	Arl5b	92	39.506