EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0045465	PABP	PF00658.18	1.4e-26	1	1
MGP_BALBcJ_P0045465	RRM_5	PF13893.6	4.3e-07	1	1
MGP_BALBcJ_P0045465	RRM_1	PF00076.22	1.9e-89	1	4
MGP_BALBcJ_P0045465	RRM_1	PF00076.22	1.9e-89	2	4
MGP_BALBcJ_P0045465	RRM_1	PF00076.22	1.9e-89	3	4
MGP_BALBcJ_P0045465	RRM_1	PF00076.22	1.9e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0045465	-	3208	-	MGP_BALBcJ_P0045465	643 (aa)	-	Q9D4E6

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0023107	Pabpc6	56	40.741	MGP_BALBcJ_G0027577	Sf3b4	64	40.741
MGP_BALBcJ_G0023107	Pabpc6	97	56.625	MGP_BALBcJ_G0026809	Pabpc1l	99	56.467
MGP_BALBcJ_G0023107	Pabpc6	57	34.667	MGP_BALBcJ_G0029975	Rbm19	70	34.667
MGP_BALBcJ_G0023107	Pabpc6	51	34.211	MGP_BALBcJ_G0025305	Celf2	57	34.211
MGP_BALBcJ_G0023107	Pabpc6	59	58.470	MGP_BALBcJ_G0036017	Pabpc5	95	58.445
MGP_BALBcJ_G0023107	Pabpc6	62	36.842	MGP_BALBcJ_G0024174	Celf4	62	36.842
MGP_BALBcJ_G0023107	Pabpc6	58	64.497	MGP_BALBcJ_G0027162	Pabpc4l	98	64.497
MGP_BALBcJ_G0023107	Pabpc6	58	36.905	MGP_BALBcJ_G0030954	Tia1	96	36.905
MGP_BALBcJ_G0023107	Pabpc6	53	35.526	MGP_BALBcJ_G0026107	Celf1	52	35.526
MGP_BALBcJ_G0023107	Pabpc6	72	36.585	MGP_BALBcJ_G0027523	Celf3	80	37.500
MGP_BALBcJ_G0023107	Pabpc6	59	34.091	MGP_BALBcJ_G0035377	Rbms3	77	33.708
MGP_BALBcJ_G0023107	Pabpc6	98	64.796	MGP_BALBcJ_G0027014	-	99	64.796
MGP_BALBcJ_G0023107	Pabpc6	60	32.468	MGP_BALBcJ_G0028558	Elavl4	88	32.468
MGP_BALBcJ_G0023107	Pabpc6	60	37.349	MGP_BALBcJ_G0028426	Elavl2	90	37.349
MGP_BALBcJ_G0023107	Pabpc6	99	70.186	MGP_BALBcJ_G0024336	Pabpc2	99	69.876
MGP_BALBcJ_G0023107	Pabpc6	56	34.014	MGP_BALBcJ_G0033066	Tial1	94	31.783
MGP_BALBcJ_G0023107	Pabpc6	64	39.062	MGP_BALBcJ_G0034875	Celf6	77	39.062
MGP_BALBcJ_G0023107	Pabpc6	61	36.145	MGP_BALBcJ_G0034443	Elavl3	92	36.145
MGP_BALBcJ_G0023107	Pabpc6	99	80.341	MGP_BALBcJ_G0021764	Pabpc1	99	80.186
MGP_BALBcJ_G0023107	Pabpc6	99	61.798	MGP_BALBcJ_G0028720	Pabpc4	99	61.603