EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0023849 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 27218 bases
Position: chr17:53367521-53394738
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0048137	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0048137	-	1639	-	MGP_BALBcJ_P0048137	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_BALBcJ_G0023849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0023849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0023849	Rab5a	90	35.323	MGP_BALBcJ_G0036076	Rab9b	97	35.323
MGP_BALBcJ_G0023849	Rab5a	75	41.566	MGP_BALBcJ_G0035663	Rab33a	70	41.566
MGP_BALBcJ_G0023849	Rab5a	74	38.125	MGP_BALBcJ_G0015840	Rab23	67	38.125
MGP_BALBcJ_G0023849	Rab5a	81	40.782	MGP_BALBcJ_G0030984	Rab7	99	47.436
MGP_BALBcJ_G0023849	Rab5a	100	87.500	MGP_BALBcJ_G0019109	Rab5c	100	87.500
MGP_BALBcJ_G0023849	Rab5a	91	41.951	MGP_BALBcJ_G0034916	Rab11a	88	48.148
MGP_BALBcJ_G0023849	Rab5a	90	49.231	MGP_BALBcJ_G0026935	Rab22a	98	49.231
MGP_BALBcJ_G0023849	Rab5a	90	46.429	MGP_BALBcJ_G0024659	Rab1b	96	46.429
MGP_BALBcJ_G0023849	Rab5a	95	42.718	MGP_BALBcJ_G0035166	Rab6b	98	42.718
MGP_BALBcJ_G0023849	Rab5a	74	35.928	MGP_BALBcJ_G0022206	Rabl2	72	35.928
MGP_BALBcJ_G0023849	Rab5a	90	37.436	MGP_BALBcJ_G0029950	Rab35	96	37.436
MGP_BALBcJ_G0023849	Rab5a	81	45.977	MGP_BALBcJ_G0023498	Rab11b	80	45.977
MGP_BALBcJ_G0023849	Rab5a	55	30.159	MGP_BALBcJ_G0019643	Arl4a	60	30.159
MGP_BALBcJ_G0023849	Rab5a	73	33.121	MGP_BALBcJ_G0029333	Rheb	85	33.121
MGP_BALBcJ_G0023849	Rab5a	89	38.614	MGP_BALBcJ_G0025624	Rab14	94	38.614
MGP_BALBcJ_G0023849	Rab5a	77	40.351	MGP_BALBcJ_G0027170	Rab33b	75	40.351
MGP_BALBcJ_G0023849	Rab5a	74	40.881	MGP_BALBcJ_G0019803	Rab15	75	40.881
MGP_BALBcJ_G0023849	Rab5a	75	41.615	MGP_BALBcJ_G0028009	Rab2a	97	36.667
MGP_BALBcJ_G0023849	Rab5a	56	33.065	MGP_BALBcJ_G0031082	Arl8b	63	33.065
MGP_BALBcJ_G0023849	Rab5a	75	36.585	MGP_BALBcJ_G0035831	Rab39b	77	36.585
MGP_BALBcJ_G0023849	Rab5a	78	31.737	MGP_BALBcJ_G0031568	Rasl2-9	76	31.737
MGP_BALBcJ_G0023849	Rab5a	90	40.816	MGP_BALBcJ_G0024094	Rab18	93	40.816
MGP_BALBcJ_G0023849	Rab5a	81	43.678	MGP_BALBcJ_G0032499	Rab30	86	43.678
MGP_BALBcJ_G0023849	Rab5a	95	41.951	MGP_BALBcJ_G0019314	Rab37	93	41.951
MGP_BALBcJ_G0023849	Rab5a	91	30.244	MGP_BALBcJ_G0017287	Rab36	77	30.244
MGP_BALBcJ_G0023849	Rab5a	82	31.667	MGP_BALBcJ_G0033197	Hras	94	31.667
MGP_BALBcJ_G0023849	Rab5a	100	81.860	MGP_BALBcJ_G0017816	Rab5b	100	81.860
MGP_BALBcJ_G0023849	Rab5a	78	41.916	MGP_BALBcJ_G0021255	Rab2b	79	44.079
MGP_BALBcJ_G0023849	Rab5a	60	32.576	MGP_BALBcJ_G0016460	Arl8a	66	32.576
MGP_BALBcJ_G0023849	Rab5a	90	31.776	MGP_BALBcJ_G0036230	Rab9	97	31.776
MGP_BALBcJ_G0023849	Rab5a	90	40.704	MGP_BALBcJ_G0027373	Rab25	93	40.704
MGP_BALBcJ_G0023849	Rab5a	76	32.727	MGP_BALBcJ_G0027661	Nras	99	34.667
MGP_BALBcJ_G0023849	Rab5a	81	37.989	MGP_BALBcJ_G0023947	Rab12	62	37.989
MGP_BALBcJ_G0023849	Rab5a	95	41.546	MGP_BALBcJ_G0032559	Rab6a	98	41.546
MGP_BALBcJ_G0023849	Rab5a	80	31.667	MGP_BALBcJ_G0031461	Kras	94	31.667
MGP_BALBcJ_G0023849	Rab5a	90	43.814	MGP_BALBcJ_G0018005	Rab1a	95	43.814
MGP_BALBcJ_G0023849	Rab5a	73	32.500	MGP_BALBcJ_G0018708	Rab34	62	32.500
MGP_BALBcJ_G0023849	Rab5a	91	47.449	MGP_BALBcJ_G0023938	Rab31	98	47.449