EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0024089 (Gene tree)
Gene ID: -
Gene Symbol: Zeb1
Alias: 3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1
Full Name: zinc finger E-box binding homeobox 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 184226 bases
Position: chr18:2450693-2634918
Accession: 1344313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0048854	zf-C2H2	PF00096.26	3.1e-24	1	6
MGP_BALBcJ_P0048854	zf-C2H2	PF00096.26	3.1e-24	2	6
MGP_BALBcJ_P0048854	zf-C2H2	PF00096.26	3.1e-24	3	6
MGP_BALBcJ_P0048854	zf-C2H2	PF00096.26	3.1e-24	4	6
MGP_BALBcJ_P0048854	zf-C2H2	PF00096.26	3.1e-24	5	6
MGP_BALBcJ_P0048854	zf-C2H2	PF00096.26	3.1e-24	6	6
MGP_BALBcJ_P0048848	zf-C2H2	PF00096.26	1.4e-17	1	4
MGP_BALBcJ_P0048848	zf-C2H2	PF00096.26	1.4e-17	2	4
MGP_BALBcJ_P0048848	zf-C2H2	PF00096.26	1.4e-17	3	4
MGP_BALBcJ_P0048848	zf-C2H2	PF00096.26	1.4e-17	4	4
MGP_BALBcJ_P0048854	zf-met	PF12874.7	2.2e-08	1	2
MGP_BALBcJ_P0048854	zf-met	PF12874.7	2.2e-08	2	2
MGP_BALBcJ_P0048848	zf-met	PF12874.7	4.8e-06	1	2
MGP_BALBcJ_P0048848	zf-met	PF12874.7	4.8e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0048849	-	790	-	-	- (aa)	-	-
MGP_BALBcJ_T0048848	-	840	-	MGP_BALBcJ_P0048848	279 (aa)	-	-
MGP_BALBcJ_T0048847	-	1425	-	MGP_BALBcJ_P0048847	91 (aa)	-	-
MGP_BALBcJ_T0048846	-	1856	-	-	- (aa)	-	-
MGP_BALBcJ_T0048845	-	1176	XM_006525770	MGP_BALBcJ_P0048845	6 (aa)	XP_006525832	Q64318
MGP_BALBcJ_T0048850	-	774	-	MGP_BALBcJ_P0048850	154 (aa)	-	-
MGP_BALBcJ_T0048851	-	819	-	-	- (aa)	-	-
MGP_BALBcJ_T0048852	-	2464	-	-	- (aa)	-	-
MGP_BALBcJ_T0048853	-	1636	-	-	- (aa)	-	-
MGP_BALBcJ_T0048854	-	5186	-	MGP_BALBcJ_P0048854	1110 (aa)	-	-
MGP_BALBcJ_T0048855	-	2662	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0024089	Zeb1	97	57.491	MGP_BALBcJ_G0025689	Zeb2	88	58.763
MGP_BALBcJ_G0024089	Zeb1	54	37.931	MGP_BALBcJ_G0031158	Zfp637	50	48.684
MGP_BALBcJ_G0024089	Zeb1	52	33.913	MGP_BALBcJ_G0018290	Zfp672	90	37.500