EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0024246 (Gene tree)
Gene ID: -
Gene Symbol: Ankhd1
Alias: 1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085
Full Name: ankyrin repeat and KH domain containing 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 107989 bases
Position: chr18:33780936-33888924
Accession: 1921733
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0049295	KH_1	PF00013.29	1.8e-14	1	1
MGP_BALBcJ_P0049285	KH_1	PF00013.29	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0049296	-	2235	-	MGP_BALBcJ_P0049296	636 (aa)	-	-
MGP_BALBcJ_T0049297	-	860	-	MGP_BALBcJ_P0049297	168 (aa)	-	-
MGP_BALBcJ_T0049295	-	3519	-	MGP_BALBcJ_P0049295	1020 (aa)	-	-
MGP_BALBcJ_T0049294	-	500	-	-	- (aa)	-	-
MGP_BALBcJ_T0049288	-	1005	-	MGP_BALBcJ_P0049288	334 (aa)	-	-
MGP_BALBcJ_T0049289	-	1033	-	-	- (aa)	-	-
MGP_BALBcJ_T0049291	-	610	-	-	- (aa)	-	-
MGP_BALBcJ_T0049290	-	658	-	MGP_BALBcJ_P0049290	218 (aa)	-	-
MGP_BALBcJ_T0049293	-	523	-	MGP_BALBcJ_P0049293	90 (aa)	-	-
MGP_BALBcJ_T0049292	-	603	-	MGP_BALBcJ_P0049292	110 (aa)	-	-
MGP_BALBcJ_T0049283	-	641	-	MGP_BALBcJ_P0049283	213 (aa)	-	E9PUR0
MGP_BALBcJ_T0049286	-	8244	-	MGP_BALBcJ_P0049286	2488 (aa)	-	-
MGP_BALBcJ_T0049287	-	463	-	-	- (aa)	-	-
MGP_BALBcJ_T0049284	-	8211	-	MGP_BALBcJ_P0049284	2488 (aa)	-	-
MGP_BALBcJ_T0049285	-	8234	-	MGP_BALBcJ_P0049285	2551 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0024246	Ankhd1	67	84.211	MGP_BALBcJ_G0029695	Ankrd17	69	86.878