EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0024567 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 99173 bases
Position: chr18:80167806-80266978
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_BALBcJ_P0050165	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	1	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	2	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	3	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	4	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	5	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	6	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	7	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	8	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	9	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	10	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	11	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	12	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	13	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	14	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	15	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	16	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	17	18
MGP_BALBcJ_P0050161	zf-C2H2	PF00096.26	5.8e-108	18	18
MGP_BALBcJ_P0050167	zf-C2H2	PF00096.26	6.8e-06	1	1
MGP_BALBcJ_P0050161	zf-met	PF12874.7	5.9e-06	1	4
MGP_BALBcJ_P0050161	zf-met	PF12874.7	5.9e-06	2	4
MGP_BALBcJ_P0050161	zf-met	PF12874.7	5.9e-06	3	4
MGP_BALBcJ_P0050161	zf-met	PF12874.7	5.9e-06	4	4
MGP_BALBcJ_P0050165	zf-met	PF12874.7	3.4e-05	1	4
MGP_BALBcJ_P0050165	zf-met	PF12874.7	3.4e-05	2	4
MGP_BALBcJ_P0050165	zf-met	PF12874.7	3.4e-05	3	4
MGP_BALBcJ_P0050165	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0050161	-	9552	XM_006526490	MGP_BALBcJ_P0050161	1799 (aa)	XP_006526553	B2RR24
MGP_BALBcJ_T0050163	-	3227	-	MGP_BALBcJ_P0050163	42 (aa)	-	-
MGP_BALBcJ_T0050162	-	9561	-	MGP_BALBcJ_P0050162	1840 (aa)	-	-
MGP_BALBcJ_T0050165	-	6059	-	MGP_BALBcJ_P0050165	1847 (aa)	-	-
MGP_BALBcJ_T0050164	-	6170	-	MGP_BALBcJ_P0050164	485 (aa)	-	-
MGP_BALBcJ_T0050167	-	410	-	MGP_BALBcJ_P0050167	65 (aa)	-	-
MGP_BALBcJ_T0050166	-	665	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0024567's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0024567's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0024567	Zfp236	63	42.697	MGP_BALBcJ_G0018193	Zfp454	75	42.982
MGP_BALBcJ_G0024567	Zfp236	74	42.857	MGP_BALBcJ_G0032107	Zfp715	69	41.935
MGP_BALBcJ_G0024567	Zfp236	66	45.455	MGP_BALBcJ_G0031158	Zfp637	85	51.807
MGP_BALBcJ_G0024567	Zfp236	70	48.864	MGP_BALBcJ_G0027094	Mynn	62	48.864
MGP_BALBcJ_G0024567	Zfp236	72	44.545	MGP_BALBcJ_G0026868	Zfp334	68	46.667
MGP_BALBcJ_G0024567	Zfp236	70	41.121	MGP_BALBcJ_G0033744	Zfp882	87	45.652
MGP_BALBcJ_G0024567	Zfp236	70	42.991	MGP_BALBcJ_G0033743	Zfp709	86	43.750
MGP_BALBcJ_G0024567	Zfp236	62	44.318	MGP_BALBcJ_G0034450	Zfp872	94	40.800
MGP_BALBcJ_G0024567	Zfp236	61	47.674	MGP_BALBcJ_G0020223	Zkscan4	52	47.674
MGP_BALBcJ_G0024567	Zfp236	68	44.643	MGP_BALBcJ_G0031559	-	66	44.643
MGP_BALBcJ_G0024567	Zfp236	59	41.096	MGP_BALBcJ_G0031550	Zfp628	61	42.500
MGP_BALBcJ_G0024567	Zfp236	65	46.429	MGP_BALBcJ_G0032098	-	50	46.429
MGP_BALBcJ_G0024567	Zfp236	81	44.304	MGP_BALBcJ_G0030681	Repin1	99	41.667
MGP_BALBcJ_G0024567	Zfp236	77	43.860	MGP_BALBcJ_G0030812	Prdm5	87	46.739
MGP_BALBcJ_G0024567	Zfp236	54	46.739	MGP_BALBcJ_G0029820	Gfi1	100	46.739
MGP_BALBcJ_G0024567	Zfp236	62	44.068	MGP_BALBcJ_G0031807	Zfp61	57	42.857
MGP_BALBcJ_G0024567	Zfp236	65	43.119	MGP_BALBcJ_G0031805	Zfp108	73	43.119
MGP_BALBcJ_G0024567	Zfp236	67	39.806	MGP_BALBcJ_G0031800	Zfp112	52	42.742
MGP_BALBcJ_G0024567	Zfp236	70	43.411	MGP_BALBcJ_G0031801	Zfp235	66	43.411
MGP_BALBcJ_G0024567	Zfp236	69	42.647	MGP_BALBcJ_G0031808	Zfp94	76	42.647
MGP_BALBcJ_G0024567	Zfp236	59	41.748	MGP_BALBcJ_G0018928	Zfp652	60	41.748
MGP_BALBcJ_G0024567	Zfp236	78	41.667	MGP_BALBcJ_G0026906	Zfp64	70	42.500
MGP_BALBcJ_G0024567	Zfp236	81	53.333	MGP_BALBcJ_G0026905	Sall4	73	53.333
MGP_BALBcJ_G0024567	Zfp236	73	37.143	MGP_BALBcJ_G0023223	Zscan10	79	37.143
MGP_BALBcJ_G0024567	Zfp236	77	40.157	MGP_BALBcJ_G0018339	Zfp867	94	45.902
MGP_BALBcJ_G0024567	Zfp236	66	38.824	MGP_BALBcJ_G0016495	Zbtb41	61	38.824
MGP_BALBcJ_G0024567	Zfp236	75	45.283	MGP_BALBcJ_G0023194	Zfp51	78	45.283
MGP_BALBcJ_G0024567	Zfp236	69	42.222	MGP_BALBcJ_G0023192	Zfp677	78	45.455
MGP_BALBcJ_G0024567	Zfp236	76	34.940	MGP_BALBcJ_G0033043	Zfp646	90	34.940
MGP_BALBcJ_G0024567	Zfp236	61	41.228	MGP_BALBcJ_G0026439	Zfp661	69	42.857
MGP_BALBcJ_G0024567	Zfp236	69	42.727	MGP_BALBcJ_G0029032	Zbtb17	61	42.727
MGP_BALBcJ_G0024567	Zfp236	78	40.690	MGP_BALBcJ_G0033958	Zfp319	87	40.690
MGP_BALBcJ_G0024567	Zfp236	86	31.818	MGP_BALBcJ_G0017111	Zbtb24	54	45.794
MGP_BALBcJ_G0024567	Zfp236	60	45.283	MGP_BALBcJ_G0020651	Rslcan18	70	45.283
MGP_BALBcJ_G0024567	Zfp236	80	46.575	MGP_BALBcJ_G0020652	Zfp759	97	37.975
MGP_BALBcJ_G0024567	Zfp236	62	43.023	MGP_BALBcJ_G0029484	Zbtb49	62	47.887
MGP_BALBcJ_G0024567	Zfp236	69	40.559	MGP_BALBcJ_G0021980	Zfp251	79	40.559
MGP_BALBcJ_G0024567	Zfp236	53	30.734	MGP_BALBcJ_G0031561	Zfp784	79	40.244
MGP_BALBcJ_G0024567	Zfp236	78	36.471	MGP_BALBcJ_G0018290	Zfp672	96	41.096
MGP_BALBcJ_G0024567	Zfp236	60	45.652	MGP_BALBcJ_G0034117	Zfp1	67	45.652
MGP_BALBcJ_G0024567	Zfp236	72	41.228	MGP_BALBcJ_G0033890	Zfp423	94	41.228
MGP_BALBcJ_G0024567	Zfp236	58	48.780	MGP_BALBcJ_G0033020	Zfp768	53	45.536
MGP_BALBcJ_G0024567	Zfp236	79	47.059	MGP_BALBcJ_G0031974	Zfp420	99	47.059
MGP_BALBcJ_G0024567	Zfp236	63	42.500	MGP_BALBcJ_G0031839	Zfp574	95	41.304
MGP_BALBcJ_G0024567	Zfp236	69	44.643	MGP_BALBcJ_G0031558	Zfp865	78	44.643
MGP_BALBcJ_G0024567	Zfp236	71	35.669	MGP_BALBcJ_G0031259	Zfp384	68	38.655
MGP_BALBcJ_G0024567	Zfp236	80	38.732	MGP_BALBcJ_G0023214	Zfp945	77	45.349
MGP_BALBcJ_G0024567	Zfp236	57	36.242	MGP_BALBcJ_G0034200	Snai3	67	47.297
MGP_BALBcJ_G0024567	Zfp236	79	44.048	MGP_BALBcJ_G0031910	Zfp974	89	45.652