EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0024637 (Gene tree)
Gene ID: -
Gene Symbol: Gm21992
Alias: Rbm14|Rbm14-rbm4|Rbm4 fusionGN
Full Name: predicted gene 21992
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 72892 bases
Position: chr19:1551996-1624887
Accession: 5439461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0050423	zf-CCHC	PF00098.23	2.5e-07	1	1
MGP_BALBcJ_P0050425	RRM_1	PF00076.22	2.5e-26	1	3
MGP_BALBcJ_P0050425	RRM_1	PF00076.22	2.5e-26	2	3
MGP_BALBcJ_P0050425	RRM_1	PF00076.22	2.5e-26	3	3
MGP_BALBcJ_P0050423	RRM_1	PF00076.22	9.8e-18	1	2
MGP_BALBcJ_P0050423	RRM_1	PF00076.22	9.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0050424	-	456	-	MGP_BALBcJ_P0050424	19 (aa)	-	-
MGP_BALBcJ_T0050425	-	1300	-	MGP_BALBcJ_P0050425	432 (aa)	-	-
MGP_BALBcJ_T0050427	-	2301	-	-	- (aa)	-	-
MGP_BALBcJ_T0050415	-	2590	-	MGP_BALBcJ_P0050415	118 (aa)	-	B0LM42
MGP_BALBcJ_T0050423	-	1435	-	MGP_BALBcJ_P0050423	336 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0024637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0024637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0024637	Gm21992	73	100.000	MGP_BALBcJ_G0024639	-	100	100.000
MGP_BALBcJ_G0024637	Gm21992	90	31.061	MGP_BALBcJ_G0017432	Dazap1	76	32.824
MGP_BALBcJ_G0024637	Gm21992	89	54.839	MGP_BALBcJ_G0024638	Rbm4b	99	65.862
MGP_BALBcJ_G0024637	Gm21992	100	96.610	MGP_BALBcJ_G0024640	Rbm14	97	99.130