EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0024981 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 177838 bases
Position: chr19:23678390-23856227
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0051361	ResIII	PF04851.15	3.9e-08	1	1
MGP_BALBcJ_P0051362	ResIII	PF04851.15	4e-08	1	1
MGP_BALBcJ_P0051361	BRK	PF07533.16	3.7e-17	1	1
MGP_BALBcJ_P0051362	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0051368	-	426	-	-	- (aa)	-	-
MGP_BALBcJ_T0051369	-	929	-	MGP_BALBcJ_P0051369	254 (aa)	-	-
MGP_BALBcJ_T0051370	-	942	-	MGP_BALBcJ_P0051370	254 (aa)	-	-
MGP_BALBcJ_T0051373	-	1859	-	MGP_BALBcJ_P0051373	236 (aa)	-	-
MGP_BALBcJ_T0051361	-	5865	XM_006527281	MGP_BALBcJ_P0051361	1585 (aa)	XP_006527344	A0A140LHE2
MGP_BALBcJ_T0051362	-	5869	-	MGP_BALBcJ_P0051362	1603 (aa)	-	-
MGP_BALBcJ_T0051363	-	6004	-	MGP_BALBcJ_P0051363	1594 (aa)	-	-
MGP_BALBcJ_T0051364	-	869	-	MGP_BALBcJ_P0051364	214 (aa)	-	-
MGP_BALBcJ_T0051365	-	661	-	-	- (aa)	-	-
MGP_BALBcJ_T0051366	-	1584	-	-	- (aa)	-	-
MGP_BALBcJ_T0051367	-	867	-	-	- (aa)	-	-
MGP_BALBcJ_T0051377	-	968	-	MGP_BALBcJ_P0051377	119 (aa)	-	-
MGP_BALBcJ_T0051378	-	736	-	MGP_BALBcJ_P0051378	119 (aa)	-	-
MGP_BALBcJ_T0051375	-	473	-	MGP_BALBcJ_P0051375	83 (aa)	-	-
MGP_BALBcJ_T0051372	-	879	-	MGP_BALBcJ_P0051372	276 (aa)	-	-
MGP_BALBcJ_T0051376	-	1461	-	MGP_BALBcJ_P0051376	113 (aa)	-	-
MGP_BALBcJ_T0051374	-	835	-	MGP_BALBcJ_P0051374	235 (aa)	-	-
MGP_BALBcJ_T0051371	-	788	-	MGP_BALBcJ_P0051371	224 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0024981	Smarca2	98	73.008	MGP_BALBcJ_G0034428	Smarca4	93	79.849