EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0025305 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 963390 bases
Position: chr2:3521769-4485158
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0052413	RRM_1	PF00076.22	2.5e-51	1	3
MGP_BALBcJ_P0052413	RRM_1	PF00076.22	2.5e-51	2	3
MGP_BALBcJ_P0052413	RRM_1	PF00076.22	2.5e-51	3	3
MGP_BALBcJ_P0052416	RRM_1	PF00076.22	2.5e-51	1	3
MGP_BALBcJ_P0052416	RRM_1	PF00076.22	2.5e-51	2	3
MGP_BALBcJ_P0052416	RRM_1	PF00076.22	2.5e-51	3	3
MGP_BALBcJ_P0052422	RRM_1	PF00076.22	2.6e-51	1	3
MGP_BALBcJ_P0052422	RRM_1	PF00076.22	2.6e-51	2	3
MGP_BALBcJ_P0052422	RRM_1	PF00076.22	2.6e-51	3	3
MGP_BALBcJ_P0052424	RRM_1	PF00076.22	2.6e-51	1	3
MGP_BALBcJ_P0052424	RRM_1	PF00076.22	2.6e-51	2	3
MGP_BALBcJ_P0052424	RRM_1	PF00076.22	2.6e-51	3	3
MGP_BALBcJ_P0052423	RRM_1	PF00076.22	2.7e-51	1	3
MGP_BALBcJ_P0052423	RRM_1	PF00076.22	2.7e-51	2	3
MGP_BALBcJ_P0052423	RRM_1	PF00076.22	2.7e-51	3	3
MGP_BALBcJ_P0052419	RRM_1	PF00076.22	3.1e-51	1	3
MGP_BALBcJ_P0052419	RRM_1	PF00076.22	3.1e-51	2	3
MGP_BALBcJ_P0052419	RRM_1	PF00076.22	3.1e-51	3	3
MGP_BALBcJ_P0052415	RRM_1	PF00076.22	3.2e-51	1	3
MGP_BALBcJ_P0052415	RRM_1	PF00076.22	3.2e-51	2	3
MGP_BALBcJ_P0052415	RRM_1	PF00076.22	3.2e-51	3	3
MGP_BALBcJ_P0052417	RRM_1	PF00076.22	3.2e-51	1	3
MGP_BALBcJ_P0052417	RRM_1	PF00076.22	3.2e-51	2	3
MGP_BALBcJ_P0052417	RRM_1	PF00076.22	3.2e-51	3	3
MGP_BALBcJ_P0052421	RRM_1	PF00076.22	3.4e-51	1	3
MGP_BALBcJ_P0052421	RRM_1	PF00076.22	3.4e-51	2	3
MGP_BALBcJ_P0052421	RRM_1	PF00076.22	3.4e-51	3	3
MGP_BALBcJ_P0052420	RRM_1	PF00076.22	4.9e-39	1	3
MGP_BALBcJ_P0052420	RRM_1	PF00076.22	4.9e-39	2	3
MGP_BALBcJ_P0052420	RRM_1	PF00076.22	4.9e-39	3	3
MGP_BALBcJ_P0052425	RRM_1	PF00076.22	5.9e-39	1	3
MGP_BALBcJ_P0052425	RRM_1	PF00076.22	5.9e-39	2	3
MGP_BALBcJ_P0052425	RRM_1	PF00076.22	5.9e-39	3	3
MGP_BALBcJ_P0052414	RRM_1	PF00076.22	6.2e-39	1	3
MGP_BALBcJ_P0052414	RRM_1	PF00076.22	6.2e-39	2	3
MGP_BALBcJ_P0052414	RRM_1	PF00076.22	6.2e-39	3	3
MGP_BALBcJ_P0052418	RRM_1	PF00076.22	6.5e-39	1	3
MGP_BALBcJ_P0052418	RRM_1	PF00076.22	6.5e-39	2	3
MGP_BALBcJ_P0052418	RRM_1	PF00076.22	6.5e-39	3	3
MGP_BALBcJ_P0052432	RRM_1	PF00076.22	7.5e-19	1	1
MGP_BALBcJ_P0052428	RRM_1	PF00076.22	2.4e-15	1	1
MGP_BALBcJ_P0052435	RRM_1	PF00076.22	2.2e-14	1	1
MGP_BALBcJ_P0052437	RRM_1	PF00076.22	1.1e-13	1	1
MGP_BALBcJ_P0052438	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0052419	-	3587	-	MGP_BALBcJ_P0052419	508 (aa)	-	-
MGP_BALBcJ_T0052418	-	3853	-	MGP_BALBcJ_P0052418	472 (aa)	-	-
MGP_BALBcJ_T0052417	-	5468	-	MGP_BALBcJ_P0052417	526 (aa)	-	-
MGP_BALBcJ_T0052416	-	7482	-	MGP_BALBcJ_P0052416	484 (aa)	-	-
MGP_BALBcJ_T0052415	-	8729	-	MGP_BALBcJ_P0052415	526 (aa)	-	-
MGP_BALBcJ_T0052414	-	8847	-	MGP_BALBcJ_P0052414	478 (aa)	-	-
MGP_BALBcJ_T0052413	-	7709	XM_006497333	MGP_BALBcJ_P0052413	484 (aa)	XP_006497396	Q9Z0H4
MGP_BALBcJ_T0052431	-	923	-	-	- (aa)	-	-
MGP_BALBcJ_T0052430	-	405	-	-	- (aa)	-	-
MGP_BALBcJ_T0052433	-	4802	-	-	- (aa)	-	-
MGP_BALBcJ_T0052432	-	630	-	MGP_BALBcJ_P0052432	134 (aa)	-	-
MGP_BALBcJ_T0052435	-	402	-	MGP_BALBcJ_P0052435	92 (aa)	-	-
MGP_BALBcJ_T0052434	-	2075	-	-	- (aa)	-	-
MGP_BALBcJ_T0052437	-	529	-	MGP_BALBcJ_P0052437	159 (aa)	-	-
MGP_BALBcJ_T0052436	-	4143	-	-	- (aa)	-	-
MGP_BALBcJ_T0052439	-	1972	-	-	- (aa)	-	-
MGP_BALBcJ_T0052438	-	331	-	MGP_BALBcJ_P0052438	46 (aa)	-	-
MGP_BALBcJ_T0052440	-	769	-	-	- (aa)	-	-
MGP_BALBcJ_T0052426	-	1996	-	MGP_BALBcJ_P0052426	443 (aa)	-	-
MGP_BALBcJ_T0052427	-	1240	-	-	- (aa)	-	-
MGP_BALBcJ_T0052424	-	2332	-	MGP_BALBcJ_P0052424	488 (aa)	-	-
MGP_BALBcJ_T0052425	-	2177	-	MGP_BALBcJ_P0052425	460 (aa)	-	-
MGP_BALBcJ_T0052422	-	1721	-	MGP_BALBcJ_P0052422	488 (aa)	-	-
MGP_BALBcJ_T0052423	-	2338	-	MGP_BALBcJ_P0052423	490 (aa)	-	-
MGP_BALBcJ_T0052420	-	2223	-	MGP_BALBcJ_P0052420	440 (aa)	-	-
MGP_BALBcJ_T0052421	-	2525	-	MGP_BALBcJ_P0052421	520 (aa)	-	-
MGP_BALBcJ_T0052428	-	1024	-	MGP_BALBcJ_P0052428	276 (aa)	-	-
MGP_BALBcJ_T0052429	-	4798	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0025305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0025305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0025305	Celf2	82	34.667	MGP_BALBcJ_G0034443	Elavl3	73	40.741
MGP_BALBcJ_G0025305	Celf2	77	39.474	MGP_BALBcJ_G0035377	Rbms3	75	37.079
MGP_BALBcJ_G0025305	Celf2	88	32.099	MGP_BALBcJ_G0035718	Rbmx	78	30.000
MGP_BALBcJ_G0025305	Celf2	79	80.952	MGP_BALBcJ_G0034875	Celf6	91	45.567
MGP_BALBcJ_G0025305	Celf2	94	83.333	MGP_BALBcJ_G0027523	Celf3	90	55.801
MGP_BALBcJ_G0025305	Celf2	57	37.500	MGP_BALBcJ_G0028720	Pabpc4	52	37.500
MGP_BALBcJ_G0025305	Celf2	100	88.060	MGP_BALBcJ_G0026107	Celf1	100	80.082
MGP_BALBcJ_G0025305	Celf2	64	43.210	MGP_BALBcJ_G0033314	Elavl1	81	43.210
MGP_BALBcJ_G0025305	Celf2	61	38.272	MGP_BALBcJ_G0028558	Elavl4	81	38.272
MGP_BALBcJ_G0025305	Celf2	82	33.333	MGP_BALBcJ_G0017426	Cirbp	80	32.558
MGP_BALBcJ_G0025305	Celf2	57	35.714	MGP_BALBcJ_G0021764	Pabpc1	51	34.884
MGP_BALBcJ_G0025305	Celf2	90	55.556	MGP_BALBcJ_G0024174	Celf4	100	41.787
MGP_BALBcJ_G0025305	Celf2	87	33.333	MGP_BALBcJ_G0028426	Elavl2	83	39.506
MGP_BALBcJ_G0025305	Celf2	57	34.884	MGP_BALBcJ_G0026809	Pabpc1l	53	34.884
MGP_BALBcJ_G0025305	Celf2	61	35.714	MGP_BALBcJ_G0015973	Boll	57	32.000
MGP_BALBcJ_G0025305	Celf2	61	34.177	MGP_BALBcJ_G0033066	Tial1	65	31.481
MGP_BALBcJ_G0025305	Celf2	51	35.443	MGP_BALBcJ_G0030954	Tia1	83	35.443
MGP_BALBcJ_G0025305	Celf2	92	53.659	MGP_BALBcJ_G0017500	Celf5	52	53.659
MGP_BALBcJ_G0025305	Celf2	77	39.474	MGP_BALBcJ_G0017788	Rbms2	51	39.474
MGP_BALBcJ_G0025305	Celf2	57	34.211	MGP_BALBcJ_G0023107	Pabpc6	51	34.211