EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0025339 (Gene tree)
Gene ID: -
Gene Symbol: Arl5b
Alias: 4930587A11Rik|AW146430|Arl8
Full Name: ADP-ribosylation factor-like 5B
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 33046 bases
Position: chr2:12133577-12166622
Accession: 1923119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0052646	MMR_HSR1	PF01926.23	8.5e-07	1	1
MGP_BALBcJ_P0052648	MMR_HSR1	PF01926.23	9.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0052651	-	778	-	MGP_BALBcJ_P0052651	30 (aa)	-	-
MGP_BALBcJ_T0052650	-	481	-	MGP_BALBcJ_P0052650	35 (aa)	-	-
MGP_BALBcJ_T0052653	-	706	-	MGP_BALBcJ_P0052653	56 (aa)	-	-
MGP_BALBcJ_T0052652	-	3210	-	-	- (aa)	-	-
MGP_BALBcJ_T0052646	-	6919	XM_017319316	MGP_BALBcJ_P0052646	171 (aa)	XP_017174805	A0A0A6YWH0
MGP_BALBcJ_T0052648	-	6967	-	MGP_BALBcJ_P0052648	180 (aa)	-	-
MGP_BALBcJ_T0052649	-	1035	-	MGP_BALBcJ_P0052649	40 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0025339's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0025339's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0025339	Arl5b	94	39.759	MGP_BALBcJ_G0019152	Arl4d	83	39.759
MGP_BALBcJ_G0025339	Arl5b	98	81.437	MGP_BALBcJ_G0025705	Arl5a	100	79.888
MGP_BALBcJ_G0025339	Arl5b	98	49.718	MGP_BALBcJ_G0022274	Arf3	98	49.718
MGP_BALBcJ_G0025339	Arl5b	96	37.500	MGP_BALBcJ_G0027267	Arl14	90	37.500
MGP_BALBcJ_G0025339	Arl5b	96	44.512	MGP_BALBcJ_G0024717	Arl2	90	44.242
MGP_BALBcJ_G0025339	Arl5b	98	49.718	MGP_BALBcJ_G0019213	Arf2	98	49.718
MGP_BALBcJ_G0025339	Arl5b	92	37.126	MGP_BALBcJ_G0026995	Arfrp1	84	40.196
MGP_BALBcJ_G0025339	Arl5b	93	40.000	MGP_BALBcJ_G0021403	Arl11	91	40.000
MGP_BALBcJ_G0025339	Arl5b	92	39.506	MGP_BALBcJ_G0022902	Arl6	89	39.157
MGP_BALBcJ_G0025339	Arl5b	67	30.952	MGP_BALBcJ_G0026935	Rab22a	61	30.952
MGP_BALBcJ_G0025339	Arl5b	94	43.373	MGP_BALBcJ_G0019643	Arl4a	85	43.787
MGP_BALBcJ_G0025339	Arl5b	83	30.667	MGP_BALBcJ_G0031082	Arl8b	78	30.667
MGP_BALBcJ_G0025339	Arl5b	84	33.562	MGP_BALBcJ_G0016460	Arl8a	78	33.553
MGP_BALBcJ_G0025339	Arl5b	99	44.444	MGP_BALBcJ_G0030491	Arf5	100	44.444
MGP_BALBcJ_G0025339	Arl5b	97	74.286	MGP_BALBcJ_G0018987	Arl5c	98	74.286
MGP_BALBcJ_G0025339	Arl5b	96	50.000	MGP_BALBcJ_G0017573	Arl1	99	48.889
MGP_BALBcJ_G0025339	Arl5b	90	42.593	MGP_BALBcJ_G0016225	Arl4c	85	42.169
MGP_BALBcJ_G0025339	Arl5b	99	43.094	MGP_BALBcJ_G0025182	Arl3	99	43.094
MGP_BALBcJ_G0025339	Arl5b	65	34.211	MGP_BALBcJ_G0020521	Arl10	55	34.211