EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0025560 (Gene tree)
Gene ID: -
Gene Symbol: Fubp3
Alias: A330051M14Rik|AV006371|FBP3|Marta2
Full Name: far upstream element (FUSE) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 44833 bases
Position: chr2:28820454-28865286
Accession: 2443699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0053931	KH_1	PF00013.29	1e-68	1	4
MGP_BALBcJ_P0053931	KH_1	PF00013.29	1e-68	2	4
MGP_BALBcJ_P0053931	KH_1	PF00013.29	1e-68	3	4
MGP_BALBcJ_P0053931	KH_1	PF00013.29	1e-68	4	4
MGP_BALBcJ_P0053935	KH_1	PF00013.29	1.1e-68	1	4
MGP_BALBcJ_P0053935	KH_1	PF00013.29	1.1e-68	2	4
MGP_BALBcJ_P0053935	KH_1	PF00013.29	1.1e-68	3	4
MGP_BALBcJ_P0053935	KH_1	PF00013.29	1.1e-68	4	4
MGP_BALBcJ_P0053938	KH_1	PF00013.29	7.6e-19	1	1
MGP_BALBcJ_P0053934	KH_1	PF00013.29	8.1e-11	1	1
MGP_BALBcJ_P0053931	KH_2	PF07650.17	7.8e-21	1	1
MGP_BALBcJ_P0053935	KH_2	PF07650.17	8e-21	1	1
MGP_BALBcJ_P0053938	KH_2	PF07650.17	1.4e-05	1	1
MGP_BALBcJ_P0053939	DUF1897	PF09005.10	4.2e-09	1	2
MGP_BALBcJ_P0053939	DUF1897	PF09005.10	4.2e-09	2	2
MGP_BALBcJ_P0053940	DUF1897	PF09005.10	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0053940	-	437	-	MGP_BALBcJ_P0053940	52 (aa)	-	-
MGP_BALBcJ_T0053941	-	2336	-	-	- (aa)	-	-
MGP_BALBcJ_T0053939	-	837	-	MGP_BALBcJ_P0053939	103 (aa)	-	-
MGP_BALBcJ_T0053938	-	1073	-	MGP_BALBcJ_P0053938	263 (aa)	-	-
MGP_BALBcJ_T0053933	-	1909	-	-	- (aa)	-	-
MGP_BALBcJ_T0053932	-	372	-	MGP_BALBcJ_P0053932	97 (aa)	-	-
MGP_BALBcJ_T0053931	-	3262	XM_006498126	MGP_BALBcJ_P0053931	569 (aa)	XP_006498189	A0A0A6YVV5
MGP_BALBcJ_T0053937	-	908	-	MGP_BALBcJ_P0053937	191 (aa)	-	-
MGP_BALBcJ_T0053936	-	453	-	MGP_BALBcJ_P0053936	83 (aa)	-	-
MGP_BALBcJ_T0053935	-	3642	-	MGP_BALBcJ_P0053935	575 (aa)	-	-
MGP_BALBcJ_T0053934	-	425	-	MGP_BALBcJ_P0053934	123 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0025560's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0025560's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0025560	Fubp3	70	36.000	MGP_BALBcJ_G0035205	Pcbp4	83	36.000
MGP_BALBcJ_G0025560	Fubp3	95	58.824	MGP_BALBcJ_G0023908	Khsrp	84	48.682
MGP_BALBcJ_G0025560	Fubp3	77	31.973	MGP_BALBcJ_G0017327	Pcbp3	85	31.973
MGP_BALBcJ_G0025560	Fubp3	79	31.707	MGP_BALBcJ_G0027519	Tdrkh	74	31.707
MGP_BALBcJ_G0025560	Fubp3	58	30.000	MGP_BALBcJ_G0022632	Igf2bp2	66	30.000
MGP_BALBcJ_G0025560	Fubp3	88	32.370	MGP_BALBcJ_G0030957	Pcbp1	60	31.169
MGP_BALBcJ_G0025560	Fubp3	96	64.324	MGP_BALBcJ_G0027959	Fubp1	94	59.208