EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0025689 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 135888 bases
Position: chr2:42316904-42452791
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0054622	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_BALBcJ_P0054622	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_BALBcJ_P0054622	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_BALBcJ_P0054622	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_BALBcJ_P0054622	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_BALBcJ_P0054624	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_BALBcJ_P0054624	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_BALBcJ_P0054624	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_BALBcJ_P0054624	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_BALBcJ_P0054624	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_BALBcJ_P0054618	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_BALBcJ_P0054618	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_BALBcJ_P0054618	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_BALBcJ_P0054618	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_BALBcJ_P0054618	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_BALBcJ_P0054620	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_BALBcJ_P0054620	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_BALBcJ_P0054620	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_BALBcJ_P0054620	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_BALBcJ_P0054620	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_BALBcJ_P0054623	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_BALBcJ_P0054623	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_BALBcJ_P0054623	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_BALBcJ_P0054623	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_BALBcJ_P0054623	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_BALBcJ_P0054621	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_BALBcJ_P0054621	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_BALBcJ_P0054621	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_BALBcJ_P0054621	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_BALBcJ_P0054621	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_BALBcJ_P0054625	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_BALBcJ_P0054625	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_BALBcJ_P0054625	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_BALBcJ_P0054625	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_BALBcJ_P0054619	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_BALBcJ_P0054619	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_BALBcJ_P0054619	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_BALBcJ_P0054622	zf-met	PF12874.7	1.4e-06	1	1
MGP_BALBcJ_P0054624	zf-met	PF12874.7	1.7e-06	1	1
MGP_BALBcJ_P0054618	zf-met	PF12874.7	1.7e-06	1	1
MGP_BALBcJ_P0054620	zf-met	PF12874.7	1.7e-06	1	1
MGP_BALBcJ_P0054623	zf-met	PF12874.7	1.7e-06	1	1
MGP_BALBcJ_P0054621	zf-met	PF12874.7	2.3e-06	1	1
MGP_BALBcJ_P0054625	zf-met	PF12874.7	5.8e-05	1	2
MGP_BALBcJ_P0054625	zf-met	PF12874.7	5.8e-05	2	2
MGP_BALBcJ_P0054619	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0054641	-	2989	-	-	- (aa)	-	-
MGP_BALBcJ_T0054642	-	370	-	-	- (aa)	-	-
MGP_BALBcJ_T0054644	-	3836	-	-	- (aa)	-	-
MGP_BALBcJ_T0054645	-	432	-	-	- (aa)	-	-
MGP_BALBcJ_T0054643	-	644	-	-	- (aa)	-	-
MGP_BALBcJ_T0054619	-	1762	-	MGP_BALBcJ_P0054619	220 (aa)	-	-
MGP_BALBcJ_T0054618	-	9124	XM_006498042	MGP_BALBcJ_P0054618	1215 (aa)	XP_006498105	Q9R0G7
MGP_BALBcJ_T0054639	-	2608	-	-	- (aa)	-	-
MGP_BALBcJ_T0054638	-	2070	-	MGP_BALBcJ_P0054638	37 (aa)	-	-
MGP_BALBcJ_T0054635	-	550	-	MGP_BALBcJ_P0054635	91 (aa)	-	-
MGP_BALBcJ_T0054634	-	2924	-	-	- (aa)	-	-
MGP_BALBcJ_T0054637	-	462	-	MGP_BALBcJ_P0054637	83 (aa)	-	-
MGP_BALBcJ_T0054636	-	577	-	MGP_BALBcJ_P0054636	63 (aa)	-	-
MGP_BALBcJ_T0054631	-	618	-	-	- (aa)	-	-
MGP_BALBcJ_T0054630	-	631	-	MGP_BALBcJ_P0054630	141 (aa)	-	-
MGP_BALBcJ_T0054633	-	2692	-	-	- (aa)	-	-
MGP_BALBcJ_T0054632	-	443	-	MGP_BALBcJ_P0054632	113 (aa)	-	-
MGP_BALBcJ_T0054622	-	4064	-	MGP_BALBcJ_P0054622	1191 (aa)	-	-
MGP_BALBcJ_T0054623	-	4020	-	MGP_BALBcJ_P0054623	1215 (aa)	-	-
MGP_BALBcJ_T0054620	-	5624	-	MGP_BALBcJ_P0054620	1215 (aa)	-	-
MGP_BALBcJ_T0054621	-	5335	-	MGP_BALBcJ_P0054621	1259 (aa)	-	-
MGP_BALBcJ_T0054626	-	868	-	MGP_BALBcJ_P0054626	214 (aa)	-	-
MGP_BALBcJ_T0054627	-	240	-	MGP_BALBcJ_P0054627	79 (aa)	-	-
MGP_BALBcJ_T0054624	-	3913	-	MGP_BALBcJ_P0054624	1214 (aa)	-	-
MGP_BALBcJ_T0054625	-	2236	-	MGP_BALBcJ_P0054625	731 (aa)	-	-
MGP_BALBcJ_T0054628	-	709	-	MGP_BALBcJ_P0054628	184 (aa)	-	-
MGP_BALBcJ_T0054629	-	453	-	-	- (aa)	-	-
MGP_BALBcJ_T0054640	-	2690	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0025689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0025689's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0025689	Zeb2	88	58.763	MGP_BALBcJ_G0024089	Zeb1	97	57.491