EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0025735 (Gene tree)
Gene ID: -
Gene Symbol: Rbms1
Alias: 2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|Mssp|Mssp1|YC1
Full Name: RNA binding motif%2C single stranded interacting protein 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 214114 bases
Position: chr2:58159407-58373520
Accession: 1861774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0054899	RRM_1	PF00076.22	1.4e-32	1	2
MGP_BALBcJ_P0054899	RRM_1	PF00076.22	1.4e-32	2	2
MGP_BALBcJ_P0054897	RRM_1	PF00076.22	1.7e-32	1	2
MGP_BALBcJ_P0054897	RRM_1	PF00076.22	1.7e-32	2	2
MGP_BALBcJ_P0054898	RRM_1	PF00076.22	1.8e-32	1	2
MGP_BALBcJ_P0054898	RRM_1	PF00076.22	1.8e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0054899	-	1806	-	MGP_BALBcJ_P0054899	386 (aa)	-	-
MGP_BALBcJ_T0054898	-	2543	-	MGP_BALBcJ_P0054898	417 (aa)	-	-
MGP_BALBcJ_T0054905	-	123	-	-	- (aa)	-	-
MGP_BALBcJ_T0054904	-	202	-	-	- (aa)	-	-
MGP_BALBcJ_T0054903	-	217	-	-	- (aa)	-	-
MGP_BALBcJ_T0054902	-	224	-	-	- (aa)	-	-
MGP_BALBcJ_T0054901	-	757	-	-	- (aa)	-	-
MGP_BALBcJ_T0054900	-	644	-	-	- (aa)	-	-
MGP_BALBcJ_T0054897	-	4420	XM_006499940	MGP_BALBcJ_P0054897	403 (aa)	XP_006500003	Q91W59

Gene Model

Click here to download MGP_BALBcJ_G0025735's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0025735's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0025735	Rbms1	51	37.209	MGP_BALBcJ_G0028426	Elavl2	60	41.558
MGP_BALBcJ_G0025735	Rbms1	96	71.538	MGP_BALBcJ_G0035377	Rbms3	99	80.841
MGP_BALBcJ_G0025735	Rbms1	51	33.645	MGP_BALBcJ_G0034443	Elavl3	50	36.207
MGP_BALBcJ_G0025735	Rbms1	99	66.753	MGP_BALBcJ_G0017788	Rbms2	86	71.758
MGP_BALBcJ_G0025735	Rbms1	53	32.773	MGP_BALBcJ_G0028558	Elavl4	70	36.458