EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0026107 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 81133 bases
Position: chr2:88709795-88790927
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0055973	RRM_1	PF00076.22	4.1e-52	1	3
MGP_BALBcJ_P0055973	RRM_1	PF00076.22	4.1e-52	2	3
MGP_BALBcJ_P0055973	RRM_1	PF00076.22	4.1e-52	3	3
MGP_BALBcJ_P0055967	RRM_1	PF00076.22	4.2e-52	1	3
MGP_BALBcJ_P0055967	RRM_1	PF00076.22	4.2e-52	2	3
MGP_BALBcJ_P0055967	RRM_1	PF00076.22	4.2e-52	3	3
MGP_BALBcJ_P0055972	RRM_1	PF00076.22	5.2e-52	1	3
MGP_BALBcJ_P0055972	RRM_1	PF00076.22	5.2e-52	2	3
MGP_BALBcJ_P0055972	RRM_1	PF00076.22	5.2e-52	3	3
MGP_BALBcJ_P0055970	RRM_1	PF00076.22	6.7e-52	1	3
MGP_BALBcJ_P0055970	RRM_1	PF00076.22	6.7e-52	2	3
MGP_BALBcJ_P0055970	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0055971	-	271	-	-	- (aa)	-	-
MGP_BALBcJ_T0055970	-	5845	-	MGP_BALBcJ_P0055970	543 (aa)	-	-
MGP_BALBcJ_T0055966	-	350	-	-	- (aa)	-	-
MGP_BALBcJ_T0055967	-	7849	-	MGP_BALBcJ_P0055967	487 (aa)	-	-
MGP_BALBcJ_T0055973	-	4430	-	MGP_BALBcJ_P0055973	483 (aa)	-	-
MGP_BALBcJ_T0055972	-	7577	-	MGP_BALBcJ_P0055972	513 (aa)	-	-
MGP_BALBcJ_T0055974	-	486	-	-	- (aa)	-	-
MGP_BALBcJ_T0055968	-	426	-	-	- (aa)	-	-
MGP_BALBcJ_T0055969	-	478	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026107	Celf1	52	35.526	MGP_BALBcJ_G0023107	Pabpc6	53	35.526
MGP_BALBcJ_G0026107	Celf1	61	45.679	MGP_BALBcJ_G0033314	Elavl1	83	45.679
MGP_BALBcJ_G0026107	Celf1	62	40.741	MGP_BALBcJ_G0028558	Elavl4	78	40.741
MGP_BALBcJ_G0026107	Celf1	100	80.082	MGP_BALBcJ_G0025305	Celf2	100	88.060
MGP_BALBcJ_G0026107	Celf1	98	45.135	MGP_BALBcJ_G0034875	Celf6	91	45.549
MGP_BALBcJ_G0026107	Celf1	100	45.200	MGP_BALBcJ_G0024174	Celf4	100	42.430
MGP_BALBcJ_G0026107	Celf1	69	41.975	MGP_BALBcJ_G0028426	Elavl2	85	41.975
MGP_BALBcJ_G0026107	Celf1	57	37.879	MGP_BALBcJ_G0027162	Pabpc4l	65	34.211
MGP_BALBcJ_G0026107	Celf1	57	43.590	MGP_BALBcJ_G0034443	Elavl3	71	42.391
MGP_BALBcJ_G0026107	Celf1	97	43.320	MGP_BALBcJ_G0027523	Celf3	99	43.830
MGP_BALBcJ_G0026107	Celf1	53	43.421	MGP_BALBcJ_G0035377	Rbms3	68	43.421