EuRBPDB

Description

Ensembl ID: MGP_BALBcJ_G0026177 (Gene tree)
Gene ID: -
Gene Symbol: Caprin1
Alias: AL022980|Caprin-1|Gpiap|Gpiap1|Gpip137|M11s1|MMGPIP137|Mmgpip137|P137|RNG105|Rng105|caprin-1|rng105
Full Name: cell cycle associated protein 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 35554 bases
Position: chr2:101687474-101723027
Accession: 1858234
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0056408	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_BALBcJ_P0056409	Caprin-1_C	PF12287.8	1.8e-136	1	1
MGP_BALBcJ_P0056410	Caprin-1_C	PF12287.8	3.3e-90	1	1
MGP_BALBcJ_P0056415	Caprin-1_C	PF12287.8	2.8e-25	1	1
MGP_BALBcJ_P0056411	Caprin-1_C	PF12287.8	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0056421	-	391	-	-	- (aa)	-	-
MGP_BALBcJ_T0056413	-	937	-	-	- (aa)	-	-
MGP_BALBcJ_T0056412	-	816	-	-	- (aa)	-	-
MGP_BALBcJ_T0056411	-	856	-	MGP_BALBcJ_P0056411	93 (aa)	-	-
MGP_BALBcJ_T0056410	-	1923	-	MGP_BALBcJ_P0056410	213 (aa)	-	-
MGP_BALBcJ_T0056417	-	476	-	-	- (aa)	-	-
MGP_BALBcJ_T0056416	-	570	-	-	- (aa)	-	-
MGP_BALBcJ_T0056415	-	760	-	MGP_BALBcJ_P0056415	253 (aa)	-	-
MGP_BALBcJ_T0056414	-	809	-	-	- (aa)	-	-
MGP_BALBcJ_T0056408	-	6167	XM_006499902	MGP_BALBcJ_P0056408	707 (aa)	XP_006499965	Q60865
MGP_BALBcJ_T0056409	-	4067	-	MGP_BALBcJ_P0056409	707 (aa)	-	-
MGP_BALBcJ_T0056419	-	555	-	-	- (aa)	-	-
MGP_BALBcJ_T0056418	-	879	-	-	- (aa)	-	-
MGP_BALBcJ_T0056420	-	828	-	-	- (aa)	-	-
MGP_BALBcJ_T0056422	-	626	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026177	Caprin1	89	44.275	MGP_BALBcJ_G0031488	Caprin2	91	38.415