EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0026429 (Gene tree)
Gene ID: -
Gene Symbol: Ciao1
Alias: AW210570|Wdr39
Full Name: cytosolic iron-sulfur protein assembly 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 7166 bases
Position: chr2:125493514-125500679
Accession: 1346998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0057447	eIF2A	PF08662.11	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0057447	-	531	-	MGP_BALBcJ_P0057447	176 (aa)	-	-
MGP_BALBcJ_T0057446	-	581	-	-	- (aa)	-	-
MGP_BALBcJ_T0057445	-	3362	-	MGP_BALBcJ_P0057445	339 (aa)	-	Q99KN2
MGP_BALBcJ_T0057448	-	409	-	MGP_BALBcJ_P0057448	51 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0026429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0026429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026429	Ciao1	84	32.331	MGP_BALBcJ_G0023281	Tbl3	55	30.714
MGP_BALBcJ_G0026429	Ciao1	85	38.000	MGP_BALBcJ_G0035199	Poc1a	80	38.000
MGP_BALBcJ_G0026429	Ciao1	85	34.058	MGP_BALBcJ_G0022743	Wdr5b	85	34.058
MGP_BALBcJ_G0026429	Ciao1	91	36.735	MGP_BALBcJ_G0025488	Wdr5	90	36.735