EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0026788 (Gene tree)
Gene ID: -
Gene Symbol: Srsf6
Alias: 1210001E11Rik|AI314910|AW146126|Sfrs6|Srp55
Full Name: serine/arginine-rich splicing factor 6
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 5594 bases
Position: chr2:161784663-161790256
Accession: 1915246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0058977	RRM_1	PF00076.22	8.3e-32	1	2
MGP_BALBcJ_P0058977	RRM_1	PF00076.22	8.3e-32	2	2
MGP_BALBcJ_P0058979	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0058976	-	2895	-	-	- (aa)	-	-
MGP_BALBcJ_T0058977	-	3530	-	MGP_BALBcJ_P0058977	339 (aa)	-	-
MGP_BALBcJ_T0058978	-	1666	-	MGP_BALBcJ_P0058978	135 (aa)	-	-
MGP_BALBcJ_T0058979	-	515	-	MGP_BALBcJ_P0058979	135 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0026788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0026788's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026788	Srsf6	51	47.297	MGP_BALBcJ_G0029941	Srsf9	70	38.674
MGP_BALBcJ_G0026788	Srsf6	56	35.526	MGP_BALBcJ_G0026700	Raly	54	35.526
MGP_BALBcJ_G0026788	Srsf6	56	44.304	MGP_BALBcJ_G0023419	Srsf3	64	44.304
MGP_BALBcJ_G0026788	Srsf6	53	35.443	MGP_BALBcJ_G0035718	Rbmx	77	35.443
MGP_BALBcJ_G0026788	Srsf6	56	40.260	MGP_BALBcJ_G0019006	Gm12355	59	40.260
MGP_BALBcJ_G0026788	Srsf6	58	40.670	MGP_BALBcJ_G0018860	Srsf1	82	42.857
MGP_BALBcJ_G0026788	Srsf6	50	71.642	MGP_BALBcJ_G0019832	Srsf5	89	63.415
MGP_BALBcJ_G0026788	Srsf6	61	31.868	MGP_BALBcJ_G0017426	Cirbp	84	31.868