EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0026881 (Gene tree)
Gene ID: -
Gene Symbol: Stau1
Alias: 5830401L18Rik|AW549911|C85792|Stau
Full Name: staufen (RNA binding protein) homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 49542 bases
Position: chr2:165897806-165947347
Accession: 1338864
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0059331	dsrm	PF00035.26	1.2e-26	1	2
MGP_BALBcJ_P0059331	dsrm	PF00035.26	1.2e-26	2	2
MGP_BALBcJ_P0059328	dsrm	PF00035.26	1.3e-26	1	2
MGP_BALBcJ_P0059328	dsrm	PF00035.26	1.3e-26	2	2
MGP_BALBcJ_P0059332	dsrm	PF00035.26	1.4e-26	1	2
MGP_BALBcJ_P0059332	dsrm	PF00035.26	1.4e-26	2	2
MGP_BALBcJ_P0059330	dsrm	PF00035.26	2.3e-23	1	2
MGP_BALBcJ_P0059330	dsrm	PF00035.26	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0059328	-	3569	XM_006499071	MGP_BALBcJ_P0059328	489 (aa)	XP_006499134	Q9Z108
MGP_BALBcJ_T0059329	-	3573	-	-	- (aa)	-	-
MGP_BALBcJ_T0059338	-	341	-	-	- (aa)	-	-
MGP_BALBcJ_T0059337	-	788	-	-	- (aa)	-	-
MGP_BALBcJ_T0059336	-	826	-	-	- (aa)	-	-
MGP_BALBcJ_T0059335	-	862	-	-	- (aa)	-	-
MGP_BALBcJ_T0059334	-	1513	-	MGP_BALBcJ_P0059334	436 (aa)	-	-
MGP_BALBcJ_T0059333	-	774	-	-	- (aa)	-	-
MGP_BALBcJ_T0059332	-	2860	-	MGP_BALBcJ_P0059332	487 (aa)	-	-
MGP_BALBcJ_T0059331	-	2840	-	MGP_BALBcJ_P0059331	485 (aa)	-	-
MGP_BALBcJ_T0059330	-	2976	-	MGP_BALBcJ_P0059330	495 (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0026881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0026881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026881	Stau1	52	31.395	MGP_BALBcJ_G0025838	Prkra	53	31.395
MGP_BALBcJ_G0026881	Stau1	86	48.055	MGP_BALBcJ_G0015792	Stau2	85	48.046