EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0026882 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Plus strand
Length: 20136 bases
Position: chr2:165968402-165988537
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0059339	ResIII	PF04851.15	1.6e-06	1	1
MGP_BALBcJ_P0059339	DEAD	PF00270.29	7.2e-45	1	1
MGP_BALBcJ_P0059340	DEAD	PF00270.29	2.4e-18	1	1
MGP_BALBcJ_P0059341	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0059339	-	2714	XM_006499422	MGP_BALBcJ_P0059339	760 (aa)	XP_006499485	Q921N6
MGP_BALBcJ_T0059342	-	264	-	-	- (aa)	-	-
MGP_BALBcJ_T0059343	-	649	-	-	- (aa)	-	-
MGP_BALBcJ_T0059340	-	2151	-	MGP_BALBcJ_P0059340	292 (aa)	-	-
MGP_BALBcJ_T0059341	-	955	-	MGP_BALBcJ_P0059341	310 (aa)	-	-
MGP_BALBcJ_T0059344	-	708	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0026882's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0026882's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026882	Ddx27	56	32.558	MGP_BALBcJ_G0022044	Ddx17	56	33.880
MGP_BALBcJ_G0026882	Ddx27	53	31.019	MGP_BALBcJ_G0017959	Ddx56	98	33.065
MGP_BALBcJ_G0026882	Ddx27	59	33.696	MGP_BALBcJ_G0033678	Ddx49	97	38.177
MGP_BALBcJ_G0026882	Ddx27	53	37.500	MGP_BALBcJ_G0016355	Ddx18	61	37.740
MGP_BALBcJ_G0026882	Ddx27	51	35.938	MGP_BALBcJ_G0019991	Ddx24	56	35.938
MGP_BALBcJ_G0026882	Ddx27	52	34.129	MGP_BALBcJ_G0017241	Ddx50	61	34.272