EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_BALBcJ_G0026995 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_balbcj
Status: putative
Strand: Minus strand
Length: 7513 bases
Position: chr2:180682276-180689788
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_BALBcJ_P0059822	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_BALBcJ_T0059820	-	1822	-	-	- (aa)	-	-
MGP_BALBcJ_T0059821	-	1087	-	-	- (aa)	-	-
MGP_BALBcJ_T0059823	-	835	-	-	- (aa)	-	-
MGP_BALBcJ_T0059822	-	728	-	MGP_BALBcJ_P0059822	201 (aa)	-	-
MGP_BALBcJ_T0059818	-	2318	XM_011239965	MGP_BALBcJ_P0059818	121 (aa)	XP_011238267	Q8BXL7
MGP_BALBcJ_T0059819	-	2179	-	-	- (aa)	-	-
MGP_BALBcJ_T0059827	-	555	-	-	- (aa)	-	-
MGP_BALBcJ_T0059826	-	434	-	-	- (aa)	-	-
MGP_BALBcJ_T0059825	-	662	-	MGP_BALBcJ_P0059825	62 (aa)	-	-
MGP_BALBcJ_T0059824	-	748	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_BALBcJ_G0026995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_BALBcJ_G0026995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_BALBcJ_G0026995	Arfrp1	93	40.708	MGP_BALBcJ_G0018987	Arl5c	96	37.705
MGP_BALBcJ_G0026995	Arfrp1	87	32.222	MGP_BALBcJ_G0019152	Arl4d	85	32.222
MGP_BALBcJ_G0026995	Arfrp1	93	31.304	MGP_BALBcJ_G0031082	Arl8b	74	31.724
MGP_BALBcJ_G0026995	Arfrp1	93	37.931	MGP_BALBcJ_G0022274	Arf3	96	33.333
MGP_BALBcJ_G0026995	Arfrp1	93	38.938	MGP_BALBcJ_G0025705	Arl5a	97	38.587
MGP_BALBcJ_G0026995	Arfrp1	90	38.393	MGP_BALBcJ_G0030491	Arf5	94	34.225
MGP_BALBcJ_G0026995	Arfrp1	87	37.273	MGP_BALBcJ_G0021403	Arl11	94	34.659
MGP_BALBcJ_G0026995	Arfrp1	71	30.070	MGP_BALBcJ_G0016460	Arl8a	73	30.070
MGP_BALBcJ_G0026995	Arfrp1	85	34.286	MGP_BALBcJ_G0016225	Arl4c	86	34.286
MGP_BALBcJ_G0026995	Arfrp1	91	40.000	MGP_BALBcJ_G0019643	Arl4a	90	34.896
MGP_BALBcJ_G0026995	Arfrp1	87	35.185	MGP_BALBcJ_G0029950	Rab35	59	32.576
MGP_BALBcJ_G0026995	Arfrp1	93	38.793	MGP_BALBcJ_G0019213	Arf2	96	33.333
MGP_BALBcJ_G0026995	Arfrp1	92	40.000	MGP_BALBcJ_G0025182	Arl3	96	40.000
MGP_BALBcJ_G0026995	Arfrp1	84	40.196	MGP_BALBcJ_G0025339	Arl5b	92	37.126
MGP_BALBcJ_G0026995	Arfrp1	93	33.929	MGP_BALBcJ_G0022902	Arl6	92	30.387
MGP_BALBcJ_G0026995	Arfrp1	91	38.182	MGP_BALBcJ_G0024717	Arl2	97	35.106
MGP_BALBcJ_G0026995	Arfrp1	85	36.416	MGP_BALBcJ_G0017573	Arl1	98	33.862
MGP_BALBcJ_G0026995	Arfrp1	84	35.577	MGP_BALBcJ_G0027267	Arl14	83	34.911